Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0519 ATGGACAACGAAGTCGTTCAGCGCGTCTTTCATGAAGGAGGCCGCGATTACTTCCAACAACAGCCTTCAACTTCTTCATCTTCCTCCTCCATCCTTCAATCTCTTCCTCTCCATGTGTCTTTCGATCATGGCTATTATTTGCTAGTAAAATCTGTTCAAGAACTCCGAGAGAAAAAAGACGGTCTTGTTACAGTTGGCATTGGTGGTCCTAGTGGTTCTGGTAAAACAAGCTTATCAGAGAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGCAATGGAGTTGATGAAGGAAATGATTTGGATTCTATAGATTTTGATACCCTGGTCAAGAATCTCGAGGATTTGACAAAAGGTGATGATACACAAATTCCAGTTTTTGACTACCAACAAAAGAAGCGTGTTGGGTATAAAGCAATAAAGAGTGCTTCATCAGGGGTGGTAATAGTTGATGGTACATATGCTCTGCATGCAAGACTGCGGTCTTTGCTAGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCACTGGATTACCTTATTGACAGCATTTTCCCATTGTTTCGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTCGTTTCATCATTTAGAGAGGCCATCTACAAGGTCAAATGCAGAAGTGAGTCTCCAGATGGACATTTGGGTTCTGCCTTTCAACAAGATGAAGCCCGAACAGACAATTTTATAGAGATGTATCTTAGACCTCCCTCAGCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTATCACTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGGCCTAAGGCTGAGTTCGAGGTTGGGCGAATGACATTGGGGGGATTGCTGGCTCTGGGATACTCTGTTGTTGTTAGTTATAAACGAGCATCTACAACAGTCAGTAATGACAATGTTTCCATGTCTTTTGAAGCCATTGATGCGCTTGGTGAGACATACATGGTGCTGAGAGGAACAAACAGGAAAACAGTTGGAACAGAAGCATTAAAGATGGGTGTAAGTGGGCCTTGGATCACTAAATCATATCTGGAAATGATTCTTGAGAGAAGAGGCGTACCTCGTCTAAGTACACCACCACTTGTGTCAAATGCACCTATGCGTGGTAATCAAGAAAGAGCAATCATTGCACCAAAGCCAATCCGAGTTACTCCTGACCTTGTAACTGGGCTTGAGGATTTATCTCAGCCATGGACACGATCCCCAAGAAAATCTAAAATGGAACCTGTCGTAGCAACTTGGCATTTTGTATCTTCAGATTCATCTCGGCCTGACAGCTCAGTACTAGATCCTTCATCTTTCAGGGATACCATGAGGCTTGCTCCAATGCCTGATTCATACGACTTGGATAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGCTTTGTTGGAGAATAAAGGTGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCTCATAAAATGGCAAATATCATTGGTTGTGAAGTAGTTTCTTTGGAAAGCTACTATAAACGAGTAAAGGATTTTAAATATGACAATTTCAGCTCGCTTGATCTGTCTTTGCTATCAAAGAATATTGATGACATAAGAAATGGGAGAAGAACAAAAGCGCCTATATTTGACTTGGAAAGTGGTGCCCGTAGTGGCTTTAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTCTGCATCCTGATATCCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATTTCTCGAGTTCAAAGGGATAAGAGTAGGGTGGGATGTTTTATGTCCCAAACTGAGATTATGATGACAGTCTTTCCTATGTTCCAGCTGCACATCGAACCACATCTTGTTCATGCACATCTTAAGATAAGAAATGACTTTGACCCTGTCCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAGAGTAACAAAAAAGTAGCTTATCAGGATATTCTTACAATTCTTGATCCAGCGAAATTTTGCAGTTCAGTTCAGAAGTTCATTGATATATATCTAAAGCTTCCTGGGATCCCCTCTAATGGACAGCTGACAGAGGGTGATTGTATACGAGTTAGAATATGCGAAGGCAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGTCTTCTTAATCTGGGGTATCAGGCAGTTGCTTATATTGAAGCTTCTGCATTCATCTACCAAGATGGAAAGATTCTAATTGAGGTTGACCATCTACAAGATGTCTCGGGTCCATACATTCAGATTAAGGGTGTTGATAAAGATGCTGTGGCAGCAGCGGGTTCAATGCTTAAATTGGATGGTTCATATACAACTAAAAGTTATCTTCAAATAATTTTGGAAAGACTACCAGCCCTAGAAAGAACTTTTGGCGGGATTCACTCTCAGCAATCAGCGAGGCTGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGTAACTTAGCGTCAGAATGCTCACCCAGCAGGGTGGTCTCTCCAATTGAAGGCATTATTGAGGAGATGCAGTCTAGGATTAGAAGGCTTGAACGGTGGCTTACTGTAAATACGGTCATATGGACATTTCTGATGTCTGCCCTTGTGGGTTATTCACTCTATCAAAGGAAGCGTCAATGA 2859 0.4103 MDNEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSVQELREKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCTVISMENYRNGVDEGNDLDSIDFDTLVKNLEDLTKGDDTQIPVFDYQQKKRVGYKAIKSASSGVVIVDGTYALHARLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHLGSAFQQDEARTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVSNDNVSMSFEAIDALGETYMVLRGTNRKTVGTEALKMGVSGPWITKSYLEMILERRGVPRLSTPPLVSNAPMRGNQERAIIAPKPIRVTPDLVTGLEDLSQPWTRSPRKSKMEPVVATWHFVSSDSSRPDSSVLDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLSLLSKNIDDIRNGRRTKAPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQTEIMMTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILTILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDGSYTTKSYLQIILERLPALERTFGGIHSQQSARLQEIVEFIQSQGSNLASECSPSRVVSPIEGIIEEMQSRIRRLERWLTVNTVIWTFLMSALVGYSLYQRKRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0519 952 PANTHER URIDINE KINASE 10 274 - -
Bisa11g0519 952 Gene3D - 701 864 - -
Bisa11g0519 952 SUPERFAMILY CYTH-like phosphatases 725 859 IPR033469 -
Bisa11g0519 952 Gene3D - 63 242 IPR027417 -
Bisa11g0519 952 Gene3D - 516 693 IPR027417 -
Bisa11g0519 952 CDD UMPK_like 64 226 - -
Bisa11g0519 952 SMART AAA_5 516 660 IPR003593 GO:0016887
Bisa11g0519 952 SMART AAA_5 61 211 IPR003593 GO:0016887
Bisa11g0519 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 176 IPR027417 -
Bisa11g0519 952 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Bisa11g0519 952 Pfam Phosphoribulokinase / Uridine kinase family 107 223 IPR006083 GO:0005524|GO:0016301
Bisa11g0519 952 CDD UMPK_like 519 687 - -
Bisa11g0519 952 PRINTS Uridine kinase signature 517 534 - -
Bisa11g0519 952 PRINTS Uridine kinase signature 544 555 - -
Bisa11g0519 952 PRINTS Uridine kinase signature 638 648 - -
Bisa11g0519 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0519 Bisa-ChrBisa11 13973983 14010106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0519 512 653 PRT Gene Family AT1G55810 26.623 2.76e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0519 11 13973983 14010106 Bisa11g0519 11 13973983 14010106 ECH