Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0490 ATGGAGGGCTTTCTGGGTGCTCTCAAACTTCGTATAATAAAAGGAATTGGCCTTGCGGTTCGTGATACTCGTACCAGCGACCCTTATGTTGTTGTGTCCATGGTCGAACAGAAACTGAGGACTAAAGTTGTGGAAGATAACTGCAATCCTGAGTGGAATGAAGAGCTAACACTGTATTTGAAGAAAATCGACAATCCGATTATTATAAAAGTTTTCGACAAAGACACTTTCTCTGAGGATGACCCAATGGGAGAAGCAGAGTTAGACATAAAGCCACTAGTTGAGTGTGCGAAGATGGATTTGACTGACATGCCAGATGGCTGTGTATTGAAGAAAGTTCAACCTTCTAGAAGCAATTGCCTTGCTGAGGAGAGCTGCTGCACATTGAAAGATGGTAAAGTTATCCAACAAATGTATATTAGATTGAGAAACGTTGAGTGTGGAGAATTACTAGTGGAAGCAGAGTGGGATTGTTATAGCAGGCCTTCCCTTCTTGAATGTATATTAGATGAGAAAAGTTGA 522 0.4119 MEGFLGALKLRIIKGIGLAVRDTRTSDPYVVVSMVEQKLRTKVVEDNCNPEWNEELTLYLKKIDNPIIIKVFDKDTFSEDDPMGEAELDIKPLVECAKMDLTDMPDGCVLKKVQPSRSNCLAEESCCTLKDGKVIQQMYIRLRNVECGELLVEAEWDCYSRPSLLECILDEKS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0490 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 106 IPR035892 -
Bisa11g0490 173 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bisa11g0490 173 SMART C2_3c 7 102 IPR000008 -
Bisa11g0490 173 Gene3D C2 domain 5 158 IPR035892 -
Bisa11g0490 173 Pfam C2 domain 6 94 IPR000008 -
Bisa11g0490 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 156 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0490 Bisa-ChrBisa11 11463139 11465449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0490 38 156 C2H2 Transcription Factor Family AT1G70790 52.066 1.01e-45 145