LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g0482	ATGCCAATCTCTTATCTCTTTCCTTACGTTATCCTTCTTGCGTTCTCTACCTTGACAACCCCATCTTCTTCTTCTTCTTCTTCCACCGAAGCTTTTGTCTTCAGCAGCTGCTCGCCGGTAAGGTTCGCGCTAGGCTCGGCCTACGAGACCAACGTCAACACCCTCCTCACCTCCCTTATCAACTCAGCCATGTTGTCCAACTACAAGAACTTCACCATGCAAGGCTCCACCCCACAAGACACCCTCTACGGCCTTTTCCAATGTCGTGGCGACATCGGCAACACAGAGTGCTCTCGGTGTGTTGCCCAGGCCATGAGTCAGCTCAGCACCCTCTGCGTCTACGCGTGTGGTGGAGCATTGCAGCTAGACGGGTGCTTCGTCAAGTACGATAACACCACATTCCTGGGAGTGGAGGACAAGACTCAGATGCTGAGAAAATGTGGACCGTTGATTAGTATGACTTCTGATGCATTGACATGTAGAGATGTTGTGCTGTCGAATTTGGGAGCCTTGGATGGGGCCTACAGGGTGACTAGCTGTGGGGATGTCCAGGGTGTGGCACAATGCGTAGGAGATTTGAGTGCGAGTGAGTGTCAGGATTGTCTCTCTGATGCGATCCAACAGCTGAGAACGGAGTGTGGGACTGGCACATGGGGAGAGATGTACTTGGCAAATGCTATGCGCGACACTCGGAGCGTGGCAATCATTCGCCGACTGGAAATGGTAAGTAGCTACCTTCACTACCCAAGACGGTGGTTTTCACCTTCTTGA	771	0.5214	MPISYLFPYVILLAFSTLTTPSSSSSSSTEAFVFSSCSPVRFALGSAYETNVNTLLTSLINSAMLSNYKNFTMQGSTPQDTLYGLFQCRGDIGNTECSRCVAQAMSQLSTLCVYACGGALQLDGCFVKYDNTTFLGVEDKTQMLRKCGPLISMTSDALTCRDVVLSNLGALDGAYRVTSCGDVQGVAQCVGDLSASECQDCLSDAIQQLRTECGTGTWGEMYLANAMRDTRSVAIIRRLEMVSSYLHYPRRWFSPS	256

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g0482	256	Pfam	Salt stress response/antifungal	41	131	IPR002902	-
	Bisa11g0482	256	Pfam	Salt stress response/antifungal	181	213	IPR002902	-
	Bisa11g0482	256	Gene3D	-	140	228	IPR038408	-
	Bisa11g0482	256	Gene3D	-	28	134	IPR038408	-
	Bisa11g0482	256	PANTHER	ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE	6	226	-	-
	Bisa11g0482	256	FunFam	cysteine-rich repeat secretory protein 3	29	134	-	-
	Bisa11g0482	256	ProSiteProfiles	Gnk2-homologous domain profile.	135	235	IPR002902	-
	Bisa11g0482	256	ProSiteProfiles	Gnk2-homologous domain profile.	30	134	IPR002902	-

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g0482	Bisa-ChrBisa11	10916819	10917589	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g0482	12	222	Pollen Coat Proteome	AT4G20670	25.000	2.27e-14	69.3

Showing 1 to 1 of 1 entries