Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0477 ATGACGCTTCTACCGTATTTGGTTGAACAGAGCTTGCACAGAACAAGGCTCATAGAGATGGGTGAGGAGGTGAAGGCAACTGTTCCAGAGTCTGTGTTGAAGAAGCAGAAGAGGGAAGAGGAATGGGCATTGGCCAAAACGCAGCAGCTTGAAGCTGCAAAGAAGAAGAGAGCTGAGAATCGTAAGCTGATCTATAACAGAGCTAAACAGTATGCCAAGGAGTATGAGGAGCATGAAAAAGAATTGATTACATTGAAACGAGAGGCAAAGCTGAAAGGTGGATTTTATGTCGATCCAGAGGCCAAACTCTTATTTATTATCCGTATTCGTGGTATTAATGCGATGCACCCGAAGACGAGAAAGATTTTGCAGCTGTTGCGGTTGAGACAGATCTTCAATGGTGTATTTCTTAAAGTTAACAAAGCCACAATGAACATGCTGCACAGAGTTGAACCTTATGTGACTTACGGATACCCAAATTTGAAGAGCGTTAGAGAACTTATTTACAAGAGGGGTTATGGTAAACTTGACAAGCAGAGGATTGCTTTAACTGACAACAGCATTGTTGAGCAGGGATTGGGCAAGTATGGAATCATATGCACTGAAGATCTTATTCATGAGATCATAACGGTTGGACCCCATTTTAAGGAGGCCAACAACTTCCTTTGGCCATTTAAGCTCAAGGCACCTTTAGGTGGTCTGAAGAAAAAGAGAAACCACTACGTTGAGGGTGGTGATGCTGGAAACAGGGAAAATTACATCAATGAGCTCATCAGGAGAATGAACTAG 789 0.4271 MTLLPYLVEQSLHRTRLIEMGEEVKATVPESVLKKQKREEEWALAKTQQLEAAKKKRAENRKLIYNRAKQYAKEYEEHEKELITLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIVEQGLGKYGIICTEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0477 262 Gene3D - 103 205 IPR036919 -
Bisa11g0477 262 Gene3D - 206 262 IPR036919 -
Bisa11g0477 262 Pfam Ribosomal protein L30p/L7e 104 154 IPR016082 -
Bisa11g0477 262 ProSitePatterns Ribosomal protein L30 signature. 122 154 IPR018038 -
Bisa11g0477 262 NCBIfam 60S ribosomal protein uL30 29 262 IPR005998 GO:0000463|GO:0003735|GO:0022625
Bisa11g0477 262 CDD Ribosomal_L7_archeal_euk 103 262 IPR035808 -
Bisa11g0477 262 PANTHER 60S RIBOSOMAL PROTEIN L7 26 262 IPR039699 -
Bisa11g0477 262 Coils Coil 61 88 - -
Bisa11g0477 262 FunFam 60S ribosomal protein L7 103 207 - -
Bisa11g0477 262 FunFam 60S ribosomal protein L7 208 262 - -
Bisa11g0477 262 SUPERFAMILY Ribosomal protein L30p/L7e 103 262 IPR036919 -
Bisa11g0477 262 Pfam Ribosomal L30 N-terminal domain 28 99 IPR012988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0477 Bisa-ChrBisa11 10640912 10643288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0477 23 262 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 86.250 1.32e-155 431