Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0476 ATGCTGCAGGTTAAGTTCACAGATGAGGAGCTTCGTCGTAGTATGGACTTTAAACATAACATCCGTAATATGTCTGTCATTGCACATGTTGATCATGATTCCCCTGGCCACGTGGACTTCTACTCTGAGGTCACTGCAGCCCTTCGCATCACCGATGGAGCACTCGTCATCGTCGATTGGATCGAAGGCGTTTGCGTTCAAACCGAAACTGTACTCAAGCAAGCCCTTGGAGAAAGAATCAGGCCTGTGTTGACTGTGAATAAAATGGATCGGTGCTTTCTTGAGTTACAGGTTTACGCAAAGAAAGGGACTGTTGCTTTCTCTGCTGGTTTGCATGGATGGGCTTTCACTTTGACTAATTTCGCTAAAATGTATGCTTCAAAATTCGGAGTCGATGAGACAAAGGTGATGGAAAGGCTGTGGGGTGAGAATTTCTTTGACCCAGGTACGAAGAAATGGACCACCAAGAACTTTAAAACTGCCACGTGTAAGCACGGTTTTGTTCAGTTCATTTACGAACCCATTAAACAGATTATTAACACTTGCATGAACGACCAGAAGGATAAGCTCTGGCCAATGTTGCAAAAGCTTGGTGTCACTATGAAATCAGACGAGAAGGAGTTAATGGGAAAGGCATTGATGAAGCGTGTGATGCAGACGTGGCTTCCTGCGAGTAGTGCTCTTCTCGAAATGATGATCTTTCATCTTCCTTCTCCTGCAAAAGCTCAGAAGTATCGTGTCGAGGACATGTACGAAGGTCCTCTTGACGATCAATATGCTACCGCTATAAGAAACTGCGATGCTGATGGCCCTCTTATGTTGTACGTGTCTAAGATGATTCCTGCCTCTGATAAAGGTAGGTTCTTCGCTTTTGGTCGTGTCTTTTCAGGGAGAATCGCTACTGGTTTGAAGATCAGTTCATCACCAAGAACGCTACAGAAAGAAACCAATGCCCATCCAATTCGAGCGATGAAGTTCTCTGTTTCCCCTGTTGTTCGTGTAGCTGTTCAATGCAAAGTAGCATCCGATCTTCCAAAATTGGTGGAAGGCTTAAAGCGTTTGGCCAAATCAGACCCCATGGTGGTGTGTACAATCGAGGAGTCCAGCGAGCACATCATCGCTGGCGCCGGCGAGTTCAATTGGGACGAGGATTTGGCCAAGAAAATATGGTGTTTCGGCCCTGAAACTTTGAGACCTAACATGGTTGTGGACATGTGTAAGGGAGTCCAATACTTGAACGAGATTAAGGATTCTGTTGTGGTTGGATTCCAATGGGCTTCAAAGGAAGGACCACTGGCTGAGGAGAACATGAGAGGGATATGCTTTGAGGTATGCGACGTCGTTCTCCATGCTGACGCCATTCACAGAGGTGGAGGTCAGGTGATTCCTACAACAAGAAGAGTGATATACGCTTCTCATTTAACTGCCAAACCCAGACTTCTGGACCCGGTGTACATGGTGGAGATTCAAGCACCAGAGCAAGCTCTTGGAGGTATTTACAGTGTGCTGAATCAAAAACGTGGCCATGTGTTTGAGGAAATGCAAAGGCCTAGAACGCCACTTTACAACATAAAGGCTGCACAGCTTGTGTCAGAAATTCGCAAGAGGAAGGGCTTGAAGGAACAAATGACGCCTCTTTCTGAGTATGAGGATAGGCTGTAG 1662 0.4609 MLQVKFTDEELRRSMDFKHNIRNMSVIAHVDHDSPGHVDFYSEVTAALRITDGALVIVDWIEGVCVQTETVLKQALGERIRPVLTVNKMDRCFLELQVYAKKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDETKVMERLWGENFFDPGTKKWTTKNFKTATCKHGFVQFIYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPAKAQKYRVEDMYEGPLDDQYATAIRNCDADGPLMLYVSKMIPASDKGRFFAFGRVFSGRIATGLKISSSPRTLQKETNAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESSEHIIAGAGEFNWDEDLAKKIWCFGPETLRPNMVVDMCKGVQYLNEIKDSVVVGFQWASKEGPLAEENMRGICFEVCDVVLHADAIHRGGGQVIPTTRRVIYASHLTAKPRLLDPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPRTPLYNIKAAQLVSEIRKRKGLKEQMTPLSEYEDRL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0476 553 Gene3D - 475 535 - -
Bisa11g0476 553 Gene3D - 331 474 IPR014721 -
Bisa11g0476 553 SUPERFAMILY EF-G C-terminal domain-like 483 530 IPR035647 -
Bisa11g0476 553 Gene3D Translation factors 239 322 - -
Bisa11g0476 553 CDD aeEF2_snRNP_like_IV 378 485 - -
Bisa11g0476 553 SUPERFAMILY EF-G C-terminal domain-like 327 382 IPR035647 -
Bisa11g0476 553 SMART EFG_IV_2 366 477 IPR005517 GO:0005525
Bisa11g0476 553 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 310 379 - -
Bisa11g0476 553 Gene3D Yeast translation eEF2 (G' domain) 123 222 - -
Bisa11g0476 553 FunFam Elongation factor 2 118 222 - -
Bisa11g0476 553 Pfam Elongation factor Tu GTP binding domain 33 237 IPR000795 GO:0003924|GO:0005525
Bisa11g0476 553 Pfam Elongation factor G, domain IV 379 477 IPR005517 GO:0005525
Bisa11g0476 553 Gene3D - 33 122 IPR027417 -
Bisa11g0476 553 SUPERFAMILY Translation proteins 238 311 IPR009000 -
Bisa11g0476 553 SUPERFAMILY Ribosomal protein S5 domain 2-like 376 481 IPR020568 -
Bisa11g0476 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0476 Bisa-ChrBisa11 10607524 10611584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0476 376 553 Eukaryotic Initiation Factors Gene Family AT1G56070 70.404 1.69e-98 315