Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0464 ATGGGGGGAAAATGCGAGAGCTGTAGATCTTTTGTAGACGACATTTACTGGACCCATTTCAAGTTTATGCATTTTGCTCAACTTCTCCCATCTGCTTTTCATCAACACCTCGCACTTCCCAAAAGGTTTTCAGATAATTTGAGAACCAAATTGCCGGATCGCGTGAGTCTTAAAGGTCCCAGTGGTGCTGTGTGGAGTATCGGATTGACAACAAGAGATGATACCTTGCACTTCACGGATGGTTGGCAACAGTTTGTGGAAGATCACTGTCTGGAAGAGAAGGATCTCCTGGTCTTCAAGTACAATGGTGAATCACAGTTTGATGTCTTAATATTTGAAGGGGAAAGCTTCTGTGAGAAGGTAGCTTCTTATTCTGTCCGGAAATGCGGGCATACAAAGAAGAGAAACATAGATGACTGTTTGAAAGAAGCCAAAATCCCTTTTAATACTGGTGTTGAATGTACTTCACCGGAGAAAGGTCCACCTGGTGAAAGTAAAAAAGCTTGTGATGCTGCTGTGGATTGTGCCTCCCCTGAGCAAACTAACCGAAGAGGAAGACCCAAAAAAATACGTCGGGGAGGAGTTAACTGGGTTCCTGATGCCGAACCTTCTTCACCGGTCAGAAATATAACCTATGAAGTATTATATGCTTCAAACAAAAAGACTGACGCATCAAATGAGAAACAGAAGGCCCTCCAATTGGCTCAAGCAGCATGTACTGACAGCGGTTTCTATGTAGTCATGCGACCCACATATGTAAACAAGAGATTCTTTCTGCCAATCCCTAGTAAGTGGGTAAAAGAAAATCTTCCTCCACAATCCGAAGATGTAATACTACGCATGGGAGAGAGCGAGTGGCATGCCAGATTCAGCTTAGAACGCAGTCGTATTGCTGGAGTACTTACCGGCGGGTGGAAACATTTTGCACTGGACAACAAGCTGCAAGAATCTGATGTTTGTGTGTTTGAACCAGCAGGCAGTAAAGGCACCAAGCCGTTGATCATGGAAGTGAAAATATTCAGAGTTAATGAGGATTTGGTAAAGTGA 1047 0.4374 MGGKCESCRSFVDDIYWTHFKFMHFAQLLPSAFHQHLALPKRFSDNLRTKLPDRVSLKGPSGAVWSIGLTTRDDTLHFTDGWQQFVEDHCLEEKDLLVFKYNGESQFDVLIFEGESFCEKVASYSVRKCGHTKKRNIDDCLKEAKIPFNTGVECTSPEKGPPGESKKACDAAVDCASPEQTNRRGRPKKIRRGGVNWVPDAEPSSPVRNITYEVLYASNKKTDASNEKQKALQLAQAACTDSGFYVVMRPTYVNKRFFLPIPSKWVKENLPPQSEDVILRMGESEWHARFSLERSRIAGVLTGGWKHFALDNKLQESDVCVFEPAGSKGTKPLIMEVKIFRVNEDLVK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0464 348 Gene3D - 223 345 IPR015300 -
Bisa11g0464 348 CDD B3_DNA 244 341 IPR003340 GO:0003677
Bisa11g0464 348 SMART B3_2 25 115 IPR003340 GO:0003677
Bisa11g0464 348 SMART B3_2 244 343 IPR003340 GO:0003677
Bisa11g0464 348 SUPERFAMILY DNA-binding pseudobarrel domain 244 334 IPR015300 -
Bisa11g0464 348 CDD B3_DNA 25 112 IPR003340 GO:0003677
Bisa11g0464 348 ProSiteProfiles B3 DNA-binding domain profile. 22 115 IPR003340 GO:0003677
Bisa11g0464 348 Gene3D - 18 118 IPR015300 -
Bisa11g0464 348 Pfam B3 DNA binding domain 31 112 IPR003340 GO:0003677
Bisa11g0464 348 Pfam B3 DNA binding domain 244 334 IPR003340 GO:0003677
Bisa11g0464 348 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 31 344 IPR044837 -
Bisa11g0464 348 ProSiteProfiles B3 DNA-binding domain profile. 244 343 IPR003340 GO:0003677
Bisa11g0464 348 SUPERFAMILY DNA-binding pseudobarrel domain 24 113 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0464 Bisa-ChrBisa11 10219061 10223056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0464 1 344 REM Transcription Factor Family AT4G33280 34.949 5.91e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa11g0464 B3 6.1e-14 CL0405