Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0461 ATGGTAAAATCTGCCGATAATGGTTCTGGTTCTGTCCCGCCTTTCCTTAAGAAATGTTATGAGATGGTAGACGATGAGTCTACGGACTCGCTCATATCTTGGAGCAAAAGCAGTGACAGTTTTGTTATCTGGGACATGACAGAGTTCTCCGTGCGTTTGCTTCCCAAGTATTTCAAGCACAACAATTTCTCCAGCTTCATCAGGCAACTCAATATTTATGGTTTCAGGAAAACTGATACAGATCGCTGGGAATTTGCCAATGATGATTTCGTCAGAGGTCAAAAGCATTTACTGAAGAATATATGTAGAAGGAAACATCCCCATGTTGCAGATCAGCAAAAACCAGTGCAGAAGCAAGACAACTGTGATGTAGCTTCCCAAGAAGTTAAAATTCATGGCCTATGGAAAGAACTCGAGAGTCTCAAAACCGATAAAAATGCACTCATGCAGGAGTTGGTAAAACTTAGGCAGCACCAGGAATCATCCGAGAGTCATTTGCTGCGCCTGACAGATCGACTTCAAGGAATGGAAAAGAATCAGCAACAGATGTTATCGTTTTTAGTCATGGCCATGCAAATCCCTGGGTTCATGGTTCAGCTGCTGAAGCCCAAAGAAAATAATTGGCGCACGACTGAGTCAGGCAATATGTTGGAACACAGTATACAAAACGATCAACCAGTTCCTTCCGATGGGATGATAATGAAGTATCAACCACCCATAAGTGAAAAATTGAAGCCTGTAATTACACCGTCGTGTAGTTCCCATAAGCGATCAGAACCCGATCGCTCTGCTGATGGGTTGAAAGATTATTTCATCAATTCTGACTTCTTAAAAGTACTTATGGATGAAAAATCGTGTCAGTTAGAAAATCATTCTCCATTTATTCTACCAGATTTACCGGATGATGGTTCCTGGGAACAGCTTCTTTTAGATAGTCCTTTCTCGGAGAATGTTGAAGATTCTAATCCAGAAAGTGACAGGCCCTCTGATAGTGGAATGGAGATCCATAAATCCCAGAATCTTCTTCGGGTGGTTCCAGAAATGGACAACACTCAAGAGAGTGGGATGGAATTATGTGGTAATGGTGTTCATTCGGAGAACCCGCAAAGTTTGGAATCTCTGACTGAACATATGGAACTTCTGGATTCTGAAGCATATGAGGAATAG 1167 0.419 MVKSADNGSGSVPPFLKKCYEMVDDESTDSLISWSKSSDSFVIWDMTEFSVRLLPKYFKHNNFSSFIRQLNIYGFRKTDTDRWEFANDDFVRGQKHLLKNICRRKHPHVADQQKPVQKQDNCDVASQEVKIHGLWKELESLKTDKNALMQELVKLRQHQESSESHLLRLTDRLQGMEKNQQQMLSFLVMAMQIPGFMVQLLKPKENNWRTTESGNMLEHSIQNDQPVPSDGMIMKYQPPISEKLKPVITPSCSSHKRSEPDRSADGLKDYFINSDFLKVLMDEKSCQLENHSPFILPDLPDDGSWEQLLLDSPFSENVEDSNPESDRPSDSGMEIHKSQNLLRVVPEMDNTQESGMELCGNGVHSENPQSLESLTEHMELLDSEAYEE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0461 388 Gene3D - 8 105 IPR036388 -
Bisa11g0461 388 FunFam Heat shock transcription factor 1 8 105 - -
Bisa11g0461 388 MobiDBLite consensus disorder prediction 354 376 - -
Bisa11g0461 388 MobiDBLite consensus disorder prediction 312 388 - -
Bisa11g0461 388 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 240 IPR027725 -
Bisa11g0461 388 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0461 388 SUPERFAMILY "Winged helix" DNA-binding domain 11 104 IPR036390 -
Bisa11g0461 388 Coils Coil 138 158 - -
Bisa11g0461 388 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0461 388 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0461 388 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0461 388 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0461 Bisa-ChrBisa11 10162541 10166598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0461 1 383 HSF AT1G67970 46.883 1.82e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa11g0461 HSF_DNA-bind 1.7e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0461 11 10162541 10166598 Bisa11g0461 11 10162541 10166598 ECH