Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0456 ATGCAAAGATTGCCAAACGATCAATTTCCTCAAGGCTTGAGGGTCCTCCTGATAAGCAACGATCAAGCAATCTTAAGATCTATCCAGAAAGTGTCTTCACAATGTAGTTATCAAGTTAATGTACTTTTCGAGGCTACTGTTGCTTTAGATCATCTACGTGAGAAGAAAGACTGTTTCGATTTAGTTCTTTTTGACGATTACATGTCAGACATGGATGGCTATGAGTTCATCGAGCATGTACAGCTCGAAATTAATCTTCCTGTAGTCATGATATCTAGTGATGACAGAACAAGTTCTGTCATGAAGGGACTCAGAAGCGGCGCTTGTGATTATCTGATTAAGCCTGTAAGTGAGGAAGTACTGAGAAACATATGGCAGCATGCTTGGAAGAGGAATGTAATGAATGTAGAGAGAAATCAGGATGACGCGGACGCTGAAGCTGAAGCTGAATTTAAAACTTATCTTGTGGATGCAACGAGAGAGGAAGGAGGAGTAGTTAAAGCAGGCGCAAAGAGAAGCGTAAAAGAAGAAGAAGACGGTGAATTGGTCAACAATGATCCACCACTGAAGAAGCGCCGCGTGGTCTGGTCAACTGAACTCCACGCAGAATTTGTCGAAGCTGTTAATAAACTTGGTGTTGACAAGGCTGTGCCAAAGGCAATTCTCGAATCGATGAGGAGACCTGGTTTGACCAGAGAAAATGTTGCCAGTCATTTACAGAAATACAGACTTTACTTAAAGAGAACAAATGCAGAAGCACTGCATCATTCGATTAATGTTAGCTCTAGCAATGTCCACCACCAGCTTCAAGACTCAGCTATTGGTCATCCCTATGGTATCCAATATGGTGGCGATGCACCGGATCAAACAGCACCTGTTAGGGACCAAGGATATCCTATTCCGGGCGGGTTTTCTGCACTTAAAATGGAATCCCCTATGAATCTCTGTGTGTCTGTGGGAAGTAACAATGGCAACACAGTGAATGTGCCAAACGTGGATATGATAGATACCCCGGAATTGGGTATCCCTCCAGACATACCCAGATATCATCCCTCTCTTGATTATATGCCATGGGGTAATAGGTAA 1086 0.4309 MQRLPNDQFPQGLRVLLISNDQAILRSIQKVSSQCSYQVNVLFEATVALDHLREKKDCFDLVLFDDYMSDMDGYEFIEHVQLEINLPVVMISSDDRTSSVMKGLRSGACDYLIKPVSEEVLRNIWQHAWKRNVMNVERNQDDADAEAEAEFKTYLVDATREEGGVVKAGAKRSVKEEEDGELVNNDPPLKKRRVVWSTELHAEFVEAVNKLGVDKAVPKAILESMRRPGLTRENVASHLQKYRLYLKRTNAEALHHSINVSSSNVHHQLQDSAIGHPYGIQYGGDAPDQTAPVRDQGYPIPGGFSALKMESPMNLCVSVGSNNGNTVNVPNVDMIDTPELGIPPDIPRYHPSLDYMPWGNR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0456 361 Pfam Myb-like DNA-binding domain 193 243 IPR001005 -
Bisa11g0456 361 FunFam Two-component response regulator 188 250 - -
Bisa11g0456 361 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 268 IPR045279 GO:0009736
Bisa11g0456 361 SMART REC_2 13 125 IPR001789 GO:0000160
Bisa11g0456 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 247 IPR017930 -
Bisa11g0456 361 CDD REC_typeB_ARR-like 15 129 - -
Bisa11g0456 361 ProSiteProfiles Response regulatory domain profile. 14 129 IPR001789 GO:0000160
Bisa11g0456 361 SUPERFAMILY Homeodomain-like 189 248 IPR009057 -
Bisa11g0456 361 SUPERFAMILY CheY-like 11 150 IPR011006 -
Bisa11g0456 361 Pfam Response regulator receiver domain 15 123 IPR001789 GO:0000160
Bisa11g0456 361 Gene3D - 189 249 - -
Bisa11g0456 361 NCBIfam myb-like DNA-binding domain, SHAQKYF class 191 244 IPR006447 GO:0003677
Bisa11g0456 361 Gene3D - 13 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0456 Bisa-ChrBisa11 10029587 10035217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0456 7 287 Response Regulator Gene Family AT2G25180 42.014 3.59e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa11g0456 Response_reg 2.4e-15 CL0304