Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0423 ATGAATGTGTGTAAAAAGAGAGAGAAAGAGTCTCTGGTTCTCTGTCTAAGAAGCGGAAGAGAGAGAGAGAGAGTAATGAAATTAATGGGTGTGTGTTCAAATTGTGTGAATGTGGTTTGGTGTGTGGTGCTTCTTGGCACGCGCCTGGTGGATGCGTCGACATTAGCAGAGCAGGAAGCAGACAGAGTAGAGAGATTGCCAGGCCAACCTGTTGTGTCGTTTAAGCAATACGCAGGTTATATCACAGTGAATCAATCTCATGGACGAGCTCTCTTCTATTGGTTCTTTGAGTCCACTCATCAACCACACAAGAAGCCCCTTCTTCTATGGCTCAATGGAGGTCCTGGATGTTCCTCAATTGGGTATGGAGAAGCAGAGGAGTTAGGACCCTTTTTTCCCCAAAACAGCACCAAACCAAAGCTAAAGTTGAACCCTTATTCTTGGAACAAAGCTGTGAATCTTTTGTTTGTGGAATCCCCCGTTGGAGTTGGATTTTCCTACACCAACACCACCACTGACATCACTCAACTTGGTGACGCTATCACTGCGTTGGATTCACATATCTTCATCGTCAAATGGTTTCGCCGCTTTCCGCAATTCAGATCCCACGAGTTCTACATTGCAGGTGAAAGCTATGCAGGGCATTATGTTCCTCAACTCTCTGAGCTCATTTTTGACAATAATCTAAACTGCACCAAGGAAGACTACATTAACTTCAAAGGCTTCATGATTGGGAATGCATTACTGGACGACGAAACTGACCAAAAGGGGAGGATAGATTATGCTTGGGATCATGCAGTTATATCAGATGCTTTGTACCATAACATCAAAAGCAAATGCAATTTCAGCCTTAAGAAGCAATCAAAAGAGTGCACTCTTGAAATGGACAAGTACATGGACGTGTACAAGATTATAGACATGTATAGCCTTTACACTCCCATGTGTACCTCCAACAACACCAACTCCAAAACAACACAATCCTCTCGTTCTTTTTCTAAACTTAAAGAATGGCATCTACGGTCAGCAGGATATGATCCATGTGCATCAGATTATACAGAAGTGTACCTAAATAGGCCTCAAGTGCAAGAGGCATTGCATGCCAATGTTACCAAAATTCCTTATCCATGGACTCATTGCAGCGATATTATCAATTTTTGGAATGATTCACCTTTCTCAATGCTTCCTCTCATCAAGAAGCTTATTGCCGGTGGTCTTCGCATATGGATTTACAGTGGAGATACTGATGGGAGAATTCCAGTAACCGCAACAAGATACACACTAAGAAAATTGGGGCTCACCATTATTGAAGATTGGACACCCTGGTATACAAGCAAGCAGGTAGGTGGGTGGACCATTGTATACAATGGACTGACCTTTGTGACCATTAGAGGTGCTGGCCATCAGGTTCCTACTTTTGCTCCAAAGCAATCTCTCCAACTACTTCGCCACTTTTTGGCCAATAAAAAATTGCCACCTCACCCTATTTGA 1488 0.4308 MNVCKKREKESLVLCLRSGRERERVMKLMGVCSNCVNVVWCVVLLGTRLVDASTLAEQEADRVERLPGQPVVSFKQYAGYITVNQSHGRALFYWFFESTHQPHKKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSTKPKLKLNPYSWNKAVNLLFVESPVGVGFSYTNTTTDITQLGDAITALDSHIFIVKWFRRFPQFRSHEFYIAGESYAGHYVPQLSELIFDNNLNCTKEDYINFKGFMIGNALLDDETDQKGRIDYAWDHAVISDALYHNIKSKCNFSLKKQSKECTLEMDKYMDVYKIIDMYSLYTPMCTSNNTNSKTTQSSRSFSKLKEWHLRSAGYDPCASDYTEVYLNRPQVQEALHANVTKIPYPWTHCSDIINFWNDSPFSMLPLIKKLIAGGLRIWIYSGDTDGRIPVTATRYTLRKLGLTIIEDWTPWYTSKQVGGWTIVYNGLTFVTIRGAGHQVPTFAPKQSLQLLRHFLANKKLPPHPI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0423 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 193 218 IPR001563 GO:0004185|GO:0006508
Bisa11g0423 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 167 IPR001563 GO:0004185|GO:0006508
Bisa11g0423 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 156 IPR001563 GO:0004185|GO:0006508
Bisa11g0423 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Bisa11g0423 495 FunFam Carboxypeptidase 57 317 - -
Bisa11g0423 495 ProSitePatterns Serine carboxypeptidases, serine active site. 207 214 IPR018202 GO:0004185
Bisa11g0423 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 457 474 IPR033124 GO:0004185
Bisa11g0423 495 FunFam Carboxypeptidase 343 490 - -
Bisa11g0423 495 Gene3D - 393 486 - -
Bisa11g0423 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 62 474 IPR001563 GO:0004185|GO:0006508
Bisa11g0423 495 FunFam Carboxypeptidase 393 487 - -
Bisa11g0423 495 Gene3D - 347 383 - -
Bisa11g0423 495 SUPERFAMILY alpha/beta-Hydrolases 58 490 IPR029058 -
Bisa11g0423 495 Gene3D alpha/beta hydrolase 57 317 IPR029058 -
Bisa11g0423 495 Pfam Serine carboxypeptidase 68 487 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0423 Bisa-ChrBisa11 8291942 8309106 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0423 355 490 Calmodulin-binding Proteins AT2G22960 32.847 2.90e-17 78.2