Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0366 ATGTGCCCAAACCCTGTCTCCACCAGCTCCTGCCGCTCAATGATTAGAGCTCTGTTCCCTCTTCTCCATCGCTCCTTCCTTCCTTCATCTCTCAACTATCAACTCTCATTCCCTCTCCTTCCTTCTTCTCCCTTCAACACTTGTACTCTCCAACTTCCCAACTCTTCAACCCTTCCACTTCAACTTCACTCAATAAAACCCTCACTTTCTCTCACTTCATCGCTCACACAAACTCCAATTACTCTCTCTCTCTCTTCCATCTCTATCCTGTGTTGTCGGGTGTCAAGTGTGAAGCCCAGACCCATGTCTAACTCTGACGGAACCACCACCAACGGTAACAGCTCAATCATTGACCCACAGAGGCATCAGCATCAGCAGCAGCAGTCATCGTCCGGGAACGGTGCTCTCGCCGTGAAGAAGCCGCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGAGGACGCCGTATACGGATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACACGTGAGTTGGGTCACAAGTCCGACGGTCAAACCATCGAGTGGCTTCTCCGTCAGGCCGAGCCCTCTATAATAGCTGCCACCGGCACCGGCACAACTCCGGCTAGCTTCTCCACTGTCTCCGTCTCCATCCGCGGCGGCGGCGGAGGAAGCGGTGGTGGTTCGAACTCCTTGTCCTCGTCTTCCACCACTTCTACTTCTCTGGACCACAAACCCACCCTACTGGGTCCGACGCCCTTCATACTCGGGAAGCGCATACGGACCACCGATGACGATACTGCCAAGGACGATGGTGTCTCCGTGGGACCCACTGTAGGGTCTATAGTGGGTCCAACTACGCCACCCGGGCTGTGGGCCCTTCCGGCGAGGCCCGACTTCGGCCAGGTATGGAGCTTCGCTGCCGCGGCTGCTCCTCCGCCGGAGATGGTGGTGCAGCCAGCGGCGGTGTCGGTGTCGCAGCAGCAGCATGCTTCGTTATTCGTTCATCATCAGCAGCAACAAGCCATGGGCGAGGCGTCGGCGGCGAGACTCGGGAATTACCTTCCAGGGCATCTGAATTTGCTGGCTTCATTGTCGGGCGGGCCCGGAAATTCGGGCAGAAGAGATGACGAGTCTCGCTAG 1131 0.5747 MCPNPVSTSSCRSMIRALFPLLHRSFLPSSLNYQLSFPLLPSSPFNTCTLQLPNSSTLPLQLHSIKPSLSLTSSLTQTPITLSLSSISILCCRVSSVKPRPMSNSDGTTTNGNSSIIDPQRHQHQQQQSSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSIRGGGGGSGGGSNSLSSSSTTSTSLDHKPTLLGPTPFILGKRIRTTDDDTAKDDGVSVGPTVGSIVGPTTPPGLWALPARPDFGQVWSFAAAAAPPPEMVVQPAAVSVSQQQHASLFVHHQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDESR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0366 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 107 349 IPR005333 GO:0003700
Bisa11g0366 376 Pfam TCP family transcription factor 143 221 IPR017887 -
Bisa11g0366 376 ProSiteProfiles TCP domain profile. 143 197 IPR017887 -
Bisa11g0366 376 MobiDBLite consensus disorder prediction 140 155 - -
Bisa11g0366 376 MobiDBLite consensus disorder prediction 98 136 - -
Bisa11g0366 376 MobiDBLite consensus disorder prediction 198 242 - -
Bisa11g0366 376 MobiDBLite consensus disorder prediction 198 252 - -
Bisa11g0366 376 MobiDBLite consensus disorder prediction 98 155 - -
Bisa11g0366 376 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0366 Bisa-ChrBisa11 4769815 4770945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0366 131 376 TCP Transcription Factor Family AT5G23280 64.981 1.06e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa11g0366 TCP 2.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0366 11 4769815 4770945 Bisa11g0366 11 4769815 4770945 ECH