Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0346 ATGGCAACTCTTGATGTTAATATTCCTCCACCAAATCCTTCACAGCTCCTTCCAGCAGAAACTCACGGAAGAAAACGCTTCCTTCTCTCGTCGTTTAGAAAGGAGAAACCCAGAGAAGAAAGCGAAGAAGCAACCATGAGGCCGATTTTGATGAAGGGCCACGAGAGGCCATTGACGTTCCTCAAGTATAACAGAGATGGCGACCTCCTTTTCTCATGCGCTAAGGACCACAATCCCACCGTCTGGTTCGCCGACAACGGTGAACGCTTGGGCACCTATCGTGGACACAACGGCGCCGTTTGGTGCTGCGATGTCTCAAGAGATTCAATGCGGCTTATAACGGGTAGCGCGGATCAGACTGCGAAGCTATGGAATGTTCAAACTGGCCAGCAATTGTTCACGTTCAATTTTGATTCTCCTGCTAGGTCTGTGGACTTTGCTGTGGGAGACAAGCTTGTTGTCATTACAACTGATCCCTTCATGGAATTACCTTCAGCAATTCATGTCAAACGCATTGCTAGGGACCCCAGTGACCAGACTGGTGACTCCGTACTTGTCATTAAGGGCCCTCAGGGAAGAATAAATAGAGCCATTTGGGGACCCCTAAACAAAACCATTATTAGTGCTGGAGAAGATGCAGTGGTTCGTATCTGGGATTCTGAGACAGGAAAATTACTTAAAGAGTCAGACAAGGAATCTGGCCACAAAAAGACGATAACATCACTTGCAAAATCTGCAGATGGCTCACATTTCCTTACTGGTTCCCTGGATAAATCTGCCAAACTTTGGGATACCAGAACATTGACTCTTATCAAGACATATGTAACGGAACGCCCAGTCAATGCAGTTGCAATGTCGCCTCTTCTTGATCATGTGGTGATTGGTGGTGGTCAGGATGCATCAGCTGTTACAACTACTGATCACCGAGCTGGCAAATTTGAAGCCAAATTTTTTGACAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGGCATTTTGGACCAATTAATGCGCTGGCCTTCAATCCTGATGGCAAGAGCTTTTCGAGTGGAGGTGAAGATGGTTATGTAAGGTTGCATCACTTCGACGCAGATTACTTCAATATCAAAATATAG 1116 0.4597 MATLDVNIPPPNPSQLLPAETHGRKRFLLSSFRKEKPREESEEATMRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDKLVVITTDPFMELPSAIHVKRIARDPSDQTGDSVLVIKGPQGRINRAIWGPLNKTIISAGEDAVVRIWDSETGKLLKESDKESGHKKTITSLAKSADGSHFLTGSLDKSAKLWDTRTLTLIKTYVTERPVNAVAMSPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDADYFNIKI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0346 371 SMART WD40_4 267 306 IPR001680 GO:0005515
Bisa11g0346 371 SMART WD40_4 86 125 IPR001680 GO:0005515
Bisa11g0346 371 SMART WD40_4 180 219 IPR001680 GO:0005515
Bisa11g0346 371 SMART WD40_4 222 264 IPR001680 GO:0005515
Bisa11g0346 371 SMART WD40_4 39 83 IPR001680 GO:0005515
Bisa11g0346 371 SMART WD40_4 322 361 IPR001680 GO:0005515
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 329 359 IPR001680 GO:0005515
Bisa11g0346 371 Gene3D - 46 371 IPR015943 GO:0005515
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 51 92 IPR001680 GO:0005515
Bisa11g0346 371 ProSitePatterns Trp-Asp (WD) repeats signature. 206 220 IPR019775 -
Bisa11g0346 371 CDD WD40 52 359 - -
Bisa11g0346 371 SUPERFAMILY WD40 repeat-like 48 359 IPR036322 GO:0005515
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 187 224 - -
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 93 130 - -
Bisa11g0346 371 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 46 371 IPR027525 GO:0003743|GO:0005737|GO:0005852
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 93 134 IPR001680 GO:0005515
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 228 IPR001680 GO:0005515
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 232 267 - -
Bisa11g0346 371 PRINTS G protein beta WD-40 repeat signature 206 220 IPR020472 -
Bisa11g0346 371 PRINTS G protein beta WD-40 repeat signature 112 126 IPR020472 -
Bisa11g0346 371 PRINTS G protein beta WD-40 repeat signature 251 265 IPR020472 -
Bisa11g0346 371 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 46 370 - -
Bisa11g0346 371 ProSitePatterns Trp-Asp (WD) repeats signature. 112 126 IPR019775 -
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 329 359 - -
Bisa11g0346 371 ProSiteProfiles Trp-Asp (WD) repeats profile. 232 273 IPR001680 GO:0005515
Bisa11g0346 371 Pfam WD domain, G-beta repeat 328 359 IPR001680 GO:0005515
Bisa11g0346 371 Pfam WD domain, G-beta repeat 233 264 IPR001680 GO:0005515
Bisa11g0346 371 Pfam WD domain, G-beta repeat 88 125 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0346 40 371 Eukaryotic Initiation Factors Gene Family AT2G46290 80.539 0.0 572