Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0338 ATGGAGAGCCACAACCCACTTCAGCTTTTACTTCTCTTTCTCATCACTACCGTCTCCTTCCTCCCTTTAACCCAACAACTAGCACCTTCATCTTCATCCTCCCTCAAGACCGATGCACAGGCTCTTCTCATGTTCAAAAAATCCATCCAAAAGGACCCTAACAGAGTCCTGTCCACGTGGCAGCTCAACAGAGACCCATGCACCTGGTATGGAGTTTCCTGCACCGGAAAACGCGTCACTCAGCTCGATCTCAGCGATAACAGTCTCTCGGGAACGTCTCTCACCGCCTTGTCTTCCTTAAACATGTTGACTGTCTTGAATTTGCATTTGAACACCTTCCCTGTAAATTCCACTTCTCTGCTTCAGCTTCCTTACAGTTTGACACAGCTCGATCTCTCCTTCTCTGGAGTTTCAGGCCCTCTCCCTGAGGATCTCTTCTCCAGGTGTCCAAATCTCGTCGTTGTGAACCTCTCTTACAACAACTTCACCGGTTCGATACCTGAAAGTTTCTTGGCTAATTCCGATAAGCTTCAGTCTCTCGATATCTCTTCGAACAACTTGTCAGGCTCGATTTCGAGCTTGAAAATCGAACGCAGTTCCTTGATACTTCTTGATCTTTCCGGAAACCGTTTATCGGATTCAATTCCGTTTTCCTTGTCGAATTGTACTGGTCTCAAGACTTTGAATCTGGGCAATAATTTGATCACAGGGGAAATTCCGAAATCTCTCGGGCAGCTTAACGAGCTGGAGATTGTGGACCTTTCTCATAATCAGATCACTGGTTGGATCCCTTTTGAGCTGGGAAACGTATGTGTTTCACTCAAAGAGCTTCGTCTCGCTTTCAACAATATCTCCGGTTCGATTCCGCCTACCTTCTCGTCTTGCTCTAAACTGCAAATTCTTGACATATCCAACAACAACATGTCGGGACCATTGCCGGATTCCATCTTTCAGAACCTGGGATCGATTCAGGAGCTGCATTTGGGAAATAACGCTATCTCGGGGCCGTTTCCTTCTTCGATATCGTCGTGCAGGAGTTTGAGGATTATTGACTTGAGCTCCAACAAAATCTCGGGGTTTATCCCGCGAGATTTATGTCCAGGGGCAGCGTCTCTTCAGGAGCTGAGAATGCCGGATAATCTCATGTCAGGAGAGATTCCCGCTCAACTGTCGAAGTGTTCACAATTGAAGACTATTGATTTTAGTTTGAACTATCTCAATGGCTCAATCCCTCCGGAGCTTGGAGAGCTTGAGAATCTTCAGCAGCTGATAGCGTGGTTCAATGGGCTTGAAGGGAAAATCCCACCAGAGTTAGGTAAATGCAAGAATCTGAAGGATCTTATACTGAATAACAACCATCTGAGCGGTGAGATTCCTATTGAGTTGTTCAATTGCAGCAATCTTGAATGGATTTCACTGACAAGCAATGGACTCACTGGCGAAATCCCGCGCGAATTCGGTGTTCTGACACGGCTGGCGGTTTTGCAGCTCGGAAACAACAGCCTGACGGGTGAGATACCTGGAGAGCTAGCAAATTGCAACAGCTTAGTTTGGTTGGATTTGAACAGTAACAAGCTCACAGGAGAGATACCACCTAGACTCGGCAGGCAGCAAGGAGCGAAATCATTGTTTGGGATTCTCTCAGGGAACACATTGGTGTTTGTTAGGAATGTTGGGAACTCATGTAAAGGAGTTGGGGGTTTGTTAGAGTTTTCCGGGATTCGACCGGAAAGACTTCAGCAGGTGCCAACACTGAGGACTTGTGATTTCACTAGATTGTATTCTGGTCCAGTTTTGAGCTTGTTCACCAAGTACCAGACTCTGGAGTATCTTGATCTTTCCTACAATGAGCTTCGTGGAAAAATCCCAGACGAATTCGGGGACATGGTGGCTTTACAGGTTCTTGAGTTATCTCACAATCAGCTATCTGGAGAGATTCCCTCATCACTCGGCCAGCTCAAGAATTTAGGTGTGTTTGATGCTTCACATAATAGGCTGCAAGGTCATATCCCGGACTCATTCTCAAACCTATCTTTTCTGGTGCAAATTGATCTGTCTTATAATGAGTTAACTGGCCAAATTCCATCTAGAGGACAACTAAGTACACTTCCGGCCACCCAGTATGCTCACAACCCTGGACTCTGTGGCGTTCCGTTGTCTGAATGCCAGAACGACAACGGCCAACCGGCAACAAATCCAAGCACGGATGATAGCAAAGGAGGCCATAAGGCAGCAGCTACATCATGGGCAAACAGCATTGTGCTGGGAGTTCTCATTTCCATTGCTTCTGTGTGTATCTTAATTGTGTGGACAATCGCGATGCGAGTGAGAAGGAAGGAGGCGGATGAAGTGAAGATGCTTAGTAGCTTGCAAGCATCTCATGCTGCCACAACATGGAAAATTGACAAGGAGAAAGAGCCCTTGAGCATTAATGTGGCAACATTTCAGAGACAACTGAGGAAGCTCAAGTTCTCACAGTTGATTGAAGCAACCAATGGCTTCTCAGCAGCTAGCCTCATTGGGTGCGGTGGCTTTGGAGAGGTGTTCAGGGCCACGCTCAAGGATGGTTCAAGCGTTGCGATAAAAAAGCTCATCCGATTGAGCTGCCAAGGCGATCGAGAGTTCATGGCAGAAATGGAAACCCTGGGAAAGATCAAGCATAAAAACCTTGTGCCTCTTTTGGGATATTGCAAGGTAGGTGAAGAGAGGCTCCTTGTTTATGAGTTTATGGAGTATGGAAGCCTAGAAGAAATGCTACATGGAAGAACAAAGACACGCGATCGACGAATTCTGACATGGGAAGAAAGAAAGAAGATTGCAAGAGGTGCTGCGAAAGGACTCTGTTTTCTCCACCACAATTGCATCCCCCACATAATACACCGCGACATGAAATCGAGCAACGTACTACTTGACCATGAAATGGAGGCCAGGGTGTCAGATTTTGGAATGGCAAGACTCATAAGTGCTCTTGACACTCATTTAAGTGTGAGCACACTGGCAGGAACACCAGGATATGTGCCACCAGAGTACTACCAGAGTTTTAGGTGCACTGCGAAGGGAGATGTCTATTCATTTGGAGTTGTGATGCTGGAACTGCTTACAGGGAAACGCCCCACGGACAAGGAGGACTTTGGTGACACAAATTTGGTGGGATGGGCCAAAATGAAGGTACGCGAAGGGAAACAGATGGAAGTGATTGACACTGAGTTACTTCTGGTGACTAAAGGAACAGATGAGGCAGAGGTCAAAGAAGTGAAAGAGATGATAAGATACTTGGAGATAACATTACAATGTGTCGATGACTTTCCTTCTAAAAGGCCAAACATGTTGCAGGTAGTAGCCATGCTGAGAGAGCTGATGCCTGGATCAGCTGATGGAAGCAGCAACAGTGCTTGA 3396 0.465 MESHNPLQLLLLFLITTVSFLPLTQQLAPSSSSSLKTDAQALLMFKKSIQKDPNRVLSTWQLNRDPCTWYGVSCTGKRVTQLDLSDNSLSGTSLTALSSLNMLTVLNLHLNTFPVNSTSLLQLPYSLTQLDLSFSGVSGPLPEDLFSRCPNLVVVNLSYNNFTGSIPESFLANSDKLQSLDISSNNLSGSISSLKIERSSLILLDLSGNRLSDSIPFSLSNCTGLKTLNLGNNLITGEIPKSLGQLNELEIVDLSHNQITGWIPFELGNVCVSLKELRLAFNNISGSIPPTFSSCSKLQILDISNNNMSGPLPDSIFQNLGSIQELHLGNNAISGPFPSSISSCRSLRIIDLSSNKISGFIPRDLCPGAASLQELRMPDNLMSGEIPAQLSKCSQLKTIDFSLNYLNGSIPPELGELENLQQLIAWFNGLEGKIPPELGKCKNLKDLILNNNHLSGEIPIELFNCSNLEWISLTSNGLTGEIPREFGVLTRLAVLQLGNNSLTGEIPGELANCNSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLQQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGKIPDEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSYNELTGQIPSRGQLSTLPATQYAHNPGLCGVPLSECQNDNGQPATNPSTDDSKGGHKAAATSWANSIVLGVLISIASVCILIVWTIAMRVRRKEADEVKMLSSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFRATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHKNLVPLLGYCKVGEERLLVYEFMEYGSLEEMLHGRTKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDTELLLVTKGTDEAEVKEVKEMIRYLEITLQCVDDFPSKRPNMLQVVAMLRELMPGSADGSSNSA 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0338 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 27 216 - -
Bisa11g0338 1131 MobiDBLite consensus disorder prediction 720 743 - -
Bisa11g0338 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 361 - -
Bisa11g0338 1131 Gene3D Phosphorylase Kinase; domain 1 793 909 - -
Bisa11g0338 1131 Pfam Brassinosteroid receptor island domain 544 602 IPR045381 -
Bisa11g0338 1131 Gene3D Ribonuclease Inhibitor 37 147 IPR032675 -
Bisa11g0338 1131 Gene3D - 547 603 - -
Bisa11g0338 1131 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Bisa11g0338 1131 MobiDBLite consensus disorder prediction 721 738 - -
Bisa11g0338 1131 SUPERFAMILY RNI-like 215 538 - -
Bisa11g0338 1131 ProSitePatterns Protein kinases ATP-binding region signature. 840 863 IPR017441 GO:0005524
Bisa11g0338 1131 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 568 726 - -
Bisa11g0338 1131 Gene3D Transferase(Phosphotransferase) domain 1 910 1127 - -
Bisa11g0338 1131 Pfam Protein tyrosine and serine/threonine kinase 838 1116 IPR001245 GO:0004672|GO:0006468
Bisa11g0338 1131 FunFam serine/threonine-protein kinase BRI1-like 2 37 147 - -
Bisa11g0338 1131 PRINTS Leucine-rich repeat signature 177 190 - -
Bisa11g0338 1131 PRINTS Leucine-rich repeat signature 246 259 - -
Bisa11g0338 1131 ProSiteProfiles Protein kinase domain profile. 834 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0338 1131 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 367 554 - -
Bisa11g0338 1131 CDD STKc_IRAK 840 1119 - -
Bisa11g0338 1131 SUPERFAMILY L domain-like 571 721 - -
Bisa11g0338 1131 Gene3D Ribonuclease Inhibitor 174 722 IPR032675 -
Bisa11g0338 1131 SMART LRR_typ_2 246 269 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 442 465 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 489 513 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 629 653 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 417 441 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 345 368 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 320 344 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 295 319 IPR003591 -
Bisa11g0338 1131 SMART LRR_typ_2 515 537 IPR003591 -
Bisa11g0338 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 958 970 IPR008271 GO:0004672|GO:0006468
Bisa11g0338 1131 SMART serkin_6 834 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0338 1131 Pfam Leucine rich repeat 201 259 IPR001611 GO:0005515
Bisa11g0338 1131 Pfam Leucine rich repeat 601 642 IPR001611 GO:0005515
Bisa11g0338 1131 Pfam Leucine rich repeat 273 333 IPR001611 GO:0005515
Bisa11g0338 1131 Pfam Leucine rich repeat 126 187 IPR001611 GO:0005515
Bisa11g0338 1131 Pfam Leucine rich repeat 466 526 IPR001611 GO:0005515
Bisa11g0338 1131 FunFam serine/threonine-protein kinase BRI1-like 2 795 909 - -
Bisa11g0338 1131 Pfam Leucine Rich Repeat 346 366 IPR001611 GO:0005515
Bisa11g0338 1131 SUPERFAMILY L domain-like 36 313 - -
Bisa11g0338 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 195 272 - -
Bisa11g0338 1131 FunFam serine/threonine-protein kinase BRI1-like 2 910 1127 - -
Bisa11g0338 1131 SUPERFAMILY Protein kinase-like (PK-like) 815 1116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0338 Bisa-ChrBisa11 3815195 3818590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0338 42 1119 Receptor kinase-like Gene Family AT1G55610 48.972 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa11g0338 PK_Tyr_Ser-Thr 6.3e-44 CL0016