Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0298 ATGGCAGCGGCCTTTGTCAAGCTGGACGATTCCCCAATGTTTCAGAAGCAGATATGCTATCTTGAACAAGCAGCTGATGAGTTAACAGATCGTTGCCAGAAACTGTACAAAGGGTGTAAGCAATTTATGGCAGCTTTGGGAGAAGCTTGTAATGGAGACATTGCCATTGCTGATGCTTTAGAAGTATTTGGTGGCGGGGTGGACGATCCTGTTAGTGTATCAATTGGAGGACCTGTCATATCTAAGTTTATTAGTGCACTACGTGAGCTTGCTACTTTTAAAGAGCTTCTCCGGTCACAGGTGGAGCATGTGTTGATTGATCGGTTGGTGCAGTTTATGACTGTTGATTTAGGAGATGCAAAGGATTCTCGCCGGCGTTTTGACAAAGCTGTACAATCTTATGATCAGGCACGAGAAAAGTTTGTGTCTTTGAAGAAGAATACACGTGAAGACATTGTTGCTGAGTTGGAAGAGGATCTTCAAAATTCAAAATCAGCATTTGAGAAAAGTCGCTTCAATCTGGTAAACACTCTCATGAATGTTGAAGTGAAAAAGAAGTATGAGTTCTTGGAGTCCTTCAGTGCAATAATGGATGCACATCTAAGATACTTCAAGCTGGGTTATGACTTACTGAGCCAAATGGAACCCTATATTCACCAGGTATTAACATATGCACAACAATCTAAAGAGCATGCTAATGTTGAGCAAGATAAGCTTGCAAAACGGATACAGGAATATAGAACACAAGCTGAGCTAGACAATATACGAGCTTCAAGCAAAGCAGATAGCATTCGAGTAGTTGGTCTGAACTCCTATAAAAGCTCTGAAGCAGTGGTAATGTCCGCAACCAATGGTGAGATTCAAACAATTAAACAAGGCTATATGCTAAAACGATCATCAAGATTGCGAGGAGATTGGAAGCGGAGATTCTTTGTACTTGACAACCAAAGGAATTTATATTACTACAGAGGGAAAGGAGCCAAACCTATGGGCTCTCAATCATATAGTTATACTCGTTCAACTGAGCAAAACAGTGGCATGTTTGGTAGATTCCGCTCTAGGCACAGCAGGACAGCTTCACTGAATGAAGAAATTCTTGATTGTCGAACAGTTGATCTATGTACATCAACCATAAAGATGGATGCAGAGGATACAGATCTACGACTTTGCTTCCGTATATTTTCTCCATCAAAAACTTATACACTGCAGGTGGAAAATGAAGCTGATAGGACAGACTGGGTAAATAAAATTACTGCAGCTATCGCGTCACTATTTAATTCTCAGTTTCTTCAACAGCCTCGTAGAGTTGCAATGCATGAAGAAAATAATACCTCATCTACTGGCACTTCATCGAATAGTCAGTCACAGCAAGGCCATGGATCTTTAATGGATGATACATATTCGAAGGAAGTAGATAGTGTCTCTAAGATTTTGCGGGGAATTCCTGGAAATGATAAATGTGCTGAGTGTAGTGCTACTGAACCAGACTGGGCATCTCTTAACCTTGGCATATTGCTTTGTATTGAATGCTCTGGTGTTCATCGAAATCTGGGAGTTCACATCTCAAAGGTAAGATCTATAACATTAGATGTCAAGGTTTGGGAACCTACCGTTTTGGACTTATTTCAAAGCTTGGGTAATGCTTACTGTAATTCTGTCTGGGAGGGACTGCTACATGATAATGAAAGAAAAGTTGAATGTAATGCACCAATTAAACCATGCACCACTGATTCATTTCAAGAAAAGGAAAAGTACATCCAAGCAAAGTACATTGAGAAATCACTAATGATCAAAGAGAGTAGCCCTGGGATCCCTTCTTCTCTTGCCAAAAGAATCTGGGAAGCAGTTCAAGCTATAAATGTACAAGAAGTGTATCGCCTCATTGTCACATCAGATGCTTCTCTAGTAAACACTAAATATGATGATGCGGTCCACCATGCTGTAGCAGAATACTTGGATCCCGGATGTAAAACAATTGAAAAACAGCAAAGTCCTGAAGCCAGTCTGAGAAGTGAAGTCCCGGATAAGCCCATGAGCTGTGTCCAAGGTTGTTCACTGTTGCATCTAGCATGTCACTATGACAGTGCACTAATGGTTGAGTTGCTGCTCCAGTTTGGTGCTGACGTAAATATGTGTGACTACCATGGAAAGACTCCATTGCACCATTGCATCTCTAGTGGAAAAAATCCATTGGCAAAGCTTCTACTTAGAAGGGGTGCAAGACCATCAATTAAAGATGGTGAGGGATACACCGCACTTGAAAGAGCAATGGAGATGGGAGCAATAACTGATGAAGAGCTATTCATTTTGCTAGCTGAATCCTAG 2325 0.4103 MAAAFVKLDDSPMFQKQICYLEQAADELTDRCQKLYKGCKQFMAALGEACNGDIAIADALEVFGGGVDDPVSVSIGGPVISKFISALRELATFKELLRSQVEHVLIDRLVQFMTVDLGDAKDSRRRFDKAVQSYDQAREKFVSLKKNTREDIVAELEEDLQNSKSAFEKSRFNLVNTLMNVEVKKKYEFLESFSAIMDAHLRYFKLGYDLLSQMEPYIHQVLTYAQQSKEHANVEQDKLAKRIQEYRTQAELDNIRASSKADSIRVVGLNSYKSSEAVVMSATNGEIQTIKQGYMLKRSSRLRGDWKRRFFVLDNQRNLYYYRGKGAKPMGSQSYSYTRSTEQNSGMFGRFRSRHSRTASLNEEILDCRTVDLCTSTIKMDAEDTDLRLCFRIFSPSKTYTLQVENEADRTDWVNKITAAIASLFNSQFLQQPRRVAMHEENNTSSTGTSSNSQSQQGHGSLMDDTYSKEVDSVSKILRGIPGNDKCAECSATEPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVKVWEPTVLDLFQSLGNAYCNSVWEGLLHDNERKVECNAPIKPCTTDSFQEKEKYIQAKYIEKSLMIKESSPGIPSSLAKRIWEAVQAINVQEVYRLIVTSDASLVNTKYDDAVHHAVAEYLDPGCKTIEKQQSPEASLRSEVPDKPMSCVQGCSLLHLACHYDSALMVELLLQFGADVNMCDYHGKTPLHHCISSGKNPLAKLLLRRGARPSIKDGEGYTALERAMEMGAITDEELFILLAES 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0298 774 Pfam PH domain 290 421 IPR001849 -
Bisa11g0298 774 Pfam BAR domain of APPL family 8 233 IPR004148 GO:0005515|GO:0005737
Bisa11g0298 774 SUPERFAMILY Ankyrin repeat 678 762 IPR036770 -
Bisa11g0298 774 CDD ArfGap 476 590 - -
Bisa11g0298 774 ProSiteProfiles ARF GTPase-activating proteins domain profile. 472 603 IPR001164 GO:0005096
Bisa11g0298 774 Pfam Putative GTPase activating protein for Arf 475 596 IPR001164 GO:0005096
Bisa11g0298 774 CDD PH_ACAP 291 426 - -
Bisa11g0298 774 PANTHER CENTAURIN/ARF 5 773 IPR045258 GO:0005096
Bisa11g0298 774 SMART PH_update 289 424 IPR001849 -
Bisa11g0298 774 SUPERFAMILY ArfGap/RecO-like zinc finger 473 596 IPR037278 -
Bisa11g0298 774 SMART arf_gap_3 472 604 IPR001164 GO:0005096
Bisa11g0298 774 SUPERFAMILY BAR/IMD domain-like 8 311 IPR027267 -
Bisa11g0298 774 ProSiteProfiles Ankyrin repeat profile. 682 714 IPR002110 GO:0005515
Bisa11g0298 774 ProSiteProfiles Ankyrin repeat profile. 715 747 IPR002110 GO:0005515
Bisa11g0298 774 Gene3D Arfaptin homology (AH) domain/BAR domain 7 252 IPR027267 -
Bisa11g0298 774 ProSiteProfiles Ankyrin repeat region circular profile. 682 713 - -
Bisa11g0298 774 Coils Coil 229 249 - -
Bisa11g0298 774 Pfam Ankyrin repeats (3 copies) 675 746 IPR002110 GO:0005515
Bisa11g0298 774 Gene3D - 284 440 IPR011993 -
Bisa11g0298 774 SMART 5bar 13 220 IPR004148 GO:0005515|GO:0005737
Bisa11g0298 774 SMART ANK_2a 715 744 IPR002110 GO:0005515
Bisa11g0298 774 SMART ANK_2a 682 711 IPR002110 GO:0005515
Bisa11g0298 774 CDD BAR_SFC_plant 16 217 IPR035670 -
Bisa11g0298 774 ProSiteProfiles Ankyrin repeat region circular profile. 715 746 - -
Bisa11g0298 774 SUPERFAMILY PH domain-like 288 433 - -
Bisa11g0298 774 ProSiteProfiles PH domain profile. 288 422 IPR001849 -
Bisa11g0298 774 Gene3D Arf GTPase activating protein 452 601 IPR038508 -
Bisa11g0298 774 Gene3D - 612 771 IPR036770 -
Bisa11g0298 774 MobiDBLite consensus disorder prediction 439 464 - -
Bisa11g0298 774 MobiDBLite consensus disorder prediction 439 463 - -
Bisa11g0298 774 PRINTS HIV Rev interacting protein signature 484 503 IPR001164 GO:0005096
Bisa11g0298 774 PRINTS HIV Rev interacting protein signature 503 520 IPR001164 GO:0005096
Bisa11g0298 774 PRINTS HIV Rev interacting protein signature 526 547 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0298 Bisa-ChrBisa11 2431957 2528180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0298 482 618 C2H2 Transcription Factor Family AT4G05330 36.913 1.12e-20 92.4