Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g2060 ATGAAATTGACAGTTAGTCATTCTGAAGAACCCCAGTCATCAAAACTAAAGCAAATAGATAGTCACTCTAAGAAGCCGAAGTTATCAAAACTGAAACAGTCTGCTAGTCATTCTAAAGAGCTAGGGTTATCTAAACCAAGACAGATAGTAGATCATTCTGGAGAGGCTGAGTTATTCTCTAGCAGTTCCTTCTGGAGTTACATGGAATGTTATTTTTTTTCCTTTAGAGGAAAGTTTTTGCTCGCCAATACAAGAAGCAGGAAGGATATGATGCTCAATTTTCAAGCGTTGGGACCCCCGATTCTTAGTTCTCTTAGTGAAAATGATCTCCTTAAAGTGGCAGATTTGATAATATCAGATAAAAAATGGGTGGTGGAGAGGCCCTCTCAAAAATTTCCTTTTCGTGACAATCCCCTGGATCATTTTTGGGGGGGGCTTAAGTTAACAAGGGATCTTTCTGGAGAGCTTGAGTTACTTTCTAACAGTTACTTCTGGAGTGACATGGAATCTTTTATTTTTTCCACCCATGGTGAAAGAATTATCACCCAATCGAGTAGCAGGGAGGATATGATGTCCCAATTTTATAAAAAATGGGTGGTGGAAAGGCCCTCTCAGAAATTTCCTTTCCGTCTCTCTTCCCCATCTGAGAACCCAATCCCAAATGATAAAGACAAGGACGAGCAAGGAAATGAAAATGCAAGCAGTATTATGACAGATAAGCAAGAATGTTGTAGAAAAGGTGGGAATTTCACACAGACGCGTACTTCATCTTCATCTTCCTCACGATGGTCCAAAGATGAAGTGGAAGCTTTGATTAGACTAGGGGCGAATTTTGATGTGGAGTGTGAAGGAAACAGACCTAAAGGGCCTTTGTGGGATGAAATATCCTGTGCGATGGAGAAGCTTGGATATGATCGGAGTGCCAAGGGATGCAAAGAGAAATGGGTGAAGGAGATGAACAAGAAAAATAGTGAAAAGCCCAAGAGGATGGAGGAATCAGTGGGTTCAAGTAAGAATCAAGTGAAACCCGAGGAGTTGCTAATGCATATGATGGGAGGTCAAGGTTAG 1068 0.411 MKLTVSHSEEPQSSKLKQIDSHSKKPKLSKLKQSASHSKELGLSKPRQIVDHSGEAELFSSSSFWSYMECYFFSFRGKFLLANTRSRKDMMLNFQALGPPILSSLSENDLLKVADLIISDKKWVVERPSQKFPFRDNPLDHFWGGLKLTRDLSGELELLSNSYFWSDMESFIFSTHGERIITQSSSREDMMSQFYKKWVVERPSQKFPFRLSSPSENPIPNDKDKDEQGNENASSIMTDKQECCRKGGNFTQTRTSSSSSSRWSKDEVEALIRLGANFDVECEGNRPKGPLWDEISCAMEKLGYDRSAKGCKEKWVKEMNKKNSEKPKRMEESVGSSKNQVKPEELLMHMMGGQG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g2060 355 Pfam Myb/SANT-like DNA-binding domain 261 325 IPR044822 -
Bisa10g2060 355 MobiDBLite consensus disorder prediction 13 27 - -
Bisa10g2060 355 MobiDBLite consensus disorder prediction 318 335 - -
Bisa10g2060 355 ProSiteProfiles Myb-like domain profile. 255 319 IPR001005 -
Bisa10g2060 355 Gene3D - 263 322 - -
Bisa10g2060 355 MobiDBLite consensus disorder prediction 231 262 - -
Bisa10g2060 355 MobiDBLite consensus disorder prediction 209 262 - -
Bisa10g2060 355 PANTHER FI21293P1 185 327 - -
Bisa10g2060 355 SUPERFAMILY Homeodomain-like 261 321 IPR009057 -
Bisa10g2060 355 MobiDBLite consensus disorder prediction 1 46 - -
Bisa10g2060 355 MobiDBLite consensus disorder prediction 318 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g2060 Bisa-ChrBisa10 54370346 54371948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g2060 246 322 Trihelix Transcription Factor Family AT1G76890 53.488 4.87e-20 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa10g2060 Myb_DNA-bind_4 1.3e-09 CL0123