Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g2059 ATGGCAATATGTTGTCCAAGTTGCTCCAAGTTCACACGAAGTACTCGTATTGCGCCTTCATTTCCACACGCCTTCCGCGTCCCTTTCCTCTTCAGTCTCCCTTCTAGTTCTGTGAGACCTACGAATCTCCATCGTATGCATAATTGCCAAAGATTTTGGCTCCAATCAAGCCGTCATTGTGGTCGCCTATTGGCTTCATCGTGCAGCAATTCTGAGCCAGCTGAATTACAGGAAGCGCGGAATGCTGTTTCTAATTTTCTTCAAGAATTCGGAGTGTCTGAGGCTGAGTCATTTTCTATTGCGTCTAGTTCACCCAGGTATTTGAGGATGTTGGTTGACGGGGTTCGGGAATTGGACGAGTTTTCGATGTGGGAAAAACAAATTGGCGGGTTCCAGGAGAAGGTAGTTCACATTGCAAGGGAGAAAGGTGATAACGGCAAAGTTGCGTACTTGGAGAGTCTTGGCTTCAGCCTCTCTTCAGCTATGAATGTCGCCAGGCATCTATCGGCGGAGACACTTCCAGCTCTCATTCATAAGGTTAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAATTATGAGGTCCCGGTCAGAAGTGTTCGCCATATGATGATGCATTTATCAATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTCGAAAAGGTTGAAGCAAGGCGTGGAGGTTTAAACATGTTGAATTCCAACGATGCTTCCTTCGGTTATTTAGTTGAATCGTTTCCTCGTCTGCTTTTATTATCAGTGAAATTTCACATGAGACCTTTTGTGGAATTTCTCGAGTGTGTTGGAATCACAAGAGGTCTCATCAGAAACATAATATTGATTTTTCCTCCATCTTTGTTGTGGAATATTGAAGTATTTAAAACTAGAGTCCTAGCCTTGAAGGAGATTGGTGTAGCAAATAAACATTATGCCAAGTTGTTGCTAAAGTATCCTTGGATTCTATCTACAAGCATTCAAGAGAACTATCAGGAGGTCCTTTCATTGTTTGATTCAGAGAAGGTTCCAAGGGCATGCATTGATCGTGCAATCAAAAGCTGGCCTCATATATTGGGTTGTTCATCTAGCAAGCTAAAGTTGATGGTTGATCAGTTTGGTGAAATAGGAGTTCAAAACAAGAAGTTGGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTGCAAAAGCCCCAAGACTTTCTCCAGATCAACCTGAGTAAGCCTGAGTGGAGTGTAGTCACTACTCACCAGTGGAATGCTGTTCCTGTATCCATTAGCATAAACAAAGCTCTTGATGTTGTCATGTTATTTGAAAATATGGGTTTTGATAGAGAAACAATTGGGAGAATACTTGCTCGCTGCCCTGAAGTCTTTGCTGCTAGCATTAGTAAAACTCTCAAGAGGAAGATTGAGTTCCTTAGTGGTGTTGGTGTTTCTGAATTTTATCTTCCTCGGGTTATTAAAAAGTATCCAGAACTCCTTGTGTCTGACACTGACAGAACTTTACTACCTCGGATGATGTTCTTGATGAAGTTAGGACTATCCGGGAAAGACATTGCATACATGGTACGATCATTTTCTCCTCTCCTTGGATACAGCATTGAGGAGGTTCTGAGACCAAAAGTAGAATTCCTGGTAAACACAATGGAGAGGCCAGTAAAGGATGTGGTGGGCTATCCGAGATACTTCAGCTATTCCTTAGAAAAGAAGATAAAGCCAAGATTTTGGGTGCTTAAAAGAAGAAATATTGAATGTAGTTTGAAGGATATGCTGGGTAAAAATGATGAAGATTTTGCTGCTGAATATATGGGTCTCCCGTCTCCATCTCCTCATCCTTGA 1848 0.4188 MAICCPSCSKFTRSTRIAPSFPHAFRVPFLFSLPSSSVRPTNLHRMHNCQRFWLQSSRHCGRLLASSCSNSEPAELQEARNAVSNFLQEFGVSEAESFSIASSSPRYLRMLVDGVRELDEFSMWEKQIGGFQEKVVHIAREKGDNGKVAYLESLGFSLSSAMNVARHLSAETLPALIHKVKCMKELFFSGSENYEVPVRSVRHMMMHLSIPIDEDLQQTLSFFEKVEARRGGLNMLNSNDASFGYLVESFPRLLLLSVKFHMRPFVEFLECVGITRGLIRNIILIFPPSLLWNIEVFKTRVLALKEIGVANKHYAKLLLKYPWILSTSIQENYQEVLSLFDSEKVPRACIDRAIKSWPHILGCSSSKLKLMVDQFGEIGVQNKKLGQVIAKSPQLLLQKPQDFLQINLSKPEWSVVTTHQWNAVPVSISINKALDVVMLFENMGFDRETIGRILARCPEVFAASISKTLKRKIEFLSGVGVSEFYLPRVIKKYPELLVSDTDRTLLPRMMFLMKLGLSGKDIAYMVRSFSPLLGYSIEEVLRPKVEFLVNTMERPVKDVVGYPRYFSYSLEKKIKPRFWVLKRRNIECSLKDMLGKNDEDFAAEYMGLPSPSPHP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g2059 615 SMART mt_12 523 555 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 SMART mt_12 280 310 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 SMART mt_12 487 518 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 SMART mt_12 556 587 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 SMART mt_12 451 482 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 SMART mt_12 351 381 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 PANTHER CGI-12 PROTEIN-RELATED 508 607 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 Pfam mTERF 299 602 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 Pfam mTERF 85 300 IPR003690 GO:0003690|GO:0006355
Bisa10g2059 615 Gene3D Transcription termination factor 3, mitochondrial 231 407 IPR038538 -
Bisa10g2059 615 Gene3D Transcription termination factor 3, mitochondrial 408 610 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g2059 Bisa-ChrBisa10 54315655 54323367 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bisa10g2059 mTERF 2.5e-87 No_clan