Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g2035 ATGGAGAGAAGAGAAGGCGGCAAGAGCCCAATTTACAATGGGCCAAAGTCCAAAGGTGAGTGGGACATTTTGGTGATCCTGCCCCGTTTGAAAACAGTGTGTGTGGTGGATAGTATATGGAGTATAACAGGGGGCGAATTTCATGCTTCCATAATCCAGCCAAGCCACAGCTCATGCAGGTTAATGTTTATTTTGGCGTACACCGCAATATCTGCTTGTTGCATTGCTTCCCTGACCCTCCCTCGATTGAATTTGTTGAAGTTCCCTATTAATAGTCATGAATTCGAAACAAAATCATCAAGTGTCCTTCTGTCCACCAAATTGTTAACGGAATATGGAGCGCCATTTCGTAACGGCTTCTTGATCATGGACCCCTCCACGTCTCGCGGTTCCAACTCCTCCACCGCTGGCCTCCTCACCGTCACCATCGCCGACGGCCAGAACGATAACCCCCTCCCTCCCCCAATCAGTGACGTCGACGACGACGACGACGTTGACTTTGCGGATCCCAACGATCCTTTCGACGTCGCTCACACCAAGCATGCACCCGTGGAGACTCTCAAGCGCTGGAGAGAAGCATCACTAGTGCTCAATCCTTCCCGGCGTTTTAGATACACTCTAGACTTCAAAAAGGGAGAGGAAGAAGAGCTGGCGAAAGGCGTGATTAGGTCTCATGCCCAAGTCGTACGAGCAGCACTGCTTTTCAGATTAGCTGGAGAAACAGATTTAGGTAAAGGAGGCACAACACCAATTCCTGTTGATAACTATGCAGTTGGGCTTGAACAACTTGTTAAAGGCTTATCAGGTTCACTAAAATCAGATGCTGAGAAAGGAATTAATGGAGATGATGCTGATATGTCACAAAGGAGAATTGCATTTGGAACGAATACATATCCGAGGAAAAAGCCAAAGAGTATCTTGATGTTTCTATGGGAGGCTTGGCAAGACCTGACCCTTATCATATTGATTATAGCAGCTGCAGTGTCATTGGCACTTGGAATAAAAACAGAGGGCTTAAAAGAAGGGTGGTATGATGGGGGAAGCATTGCCTTTGCTGTTTTTCTTGTCATTGTAGTAACAGCTGTCAGTGATTATCGCCAATCTCTGCAGTTTCAGCATTTAAATTCAGAAAAACAAAATATACAAATGGAGGTCATTAGAGGTGGTAGAGCAAAAACGATATCAATATTTGATATTGTTGTTGGTGATGTAGTACCTCTTAAAATAGGAGACCAGGTACCTGCTGATGGAGTCATGATCACTGGTCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCAAAAGGATCACAAATCACCATTTTTGATGTCTGGTTGCAAAGTGGCAGATGGAGTTGGTGTTATGCTGATAACTGGTGTTGGTATCAATACGGAGTGGGGATTGTTAATGGCAACCATTTCTGAAGATAATGGAGAAGAGACTCCATTACAGGTACGTTTAAATGGAGTTGCAACTTTTATTGGCACAGTTGGCCTTACAGTAGCTGTTTTTGTGCTAGTCGTCCTCTTGGCAAGGTACTTTACTGGCAATTCAAAAGATCTAGACGGAAGGGTCCAATTTGTTGCTGGCCAGACTAAATTTAGTAAGGCAGTAGATGGGGTCATCAAAATTTTTACTATTGCAGTCACGATTGTAGTTGTTGCAGTTCCTGAAGGTCTTCCTCTCGCAGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCCTTGGTAAGAAGGCTGTCAGCCTGTGAAACTATGGGCTCTTCAACAACAATTTGCAGTGATAAAACGGGAACATTGACCTTAAATCAGATGACTGTGGTGGAGGCATGTGTTGGGAAGGAGAAATTGAATCCGCCAAATGATTCATCAAAGTTTCAGCCAGAAGTTTTATCTCTGATAAATGAGGGCATTGCACAGAATACTACTGGAACTGTTTTTGTGCCTAAGGATGGCGGAGAGACAGAGGTTTCTGGATCTCCCACAGAAAAGGCAATCCTGTCTTGGGCGGTCAAGCTGGGGATGAATTTTGATCTTATCAGATCAAATTCAACAGTTCTCCGTGTCTTTCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTTTGCTCAAGCAGGGGGACTCTGGAGTACGTATACATTGGAAAGGAGCTGCAGAGATAGTGCTAGATGCATGCACTCAATATCTTGATTCAAATGGTTGCTTGCAATCTATTGAAAAAGAGAAGGACTTTTTCAAAGTGGCTATTGATGACATGGCTGCTCGCAGCTTACGGTGTGTTGCCATTGCATACAGGCCATATGAATTGCACAAAGTTCCCTCTGATGAGGAAGAGTTGGCCAGGTGGCCATTACCTGAAACGGAGCTCATTTTGCTCACTATAGTTGGTATAAAGGATCCCTGTCGCCCTGGCGTCAAAGAAGCAGTGACAGTATGCACAGAAGCTGGTGTTAAGGTGCGCATGGTTACAGGAGACAATATTCAAACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCACATTTAGATGCCAATGAACCAACTGTAATTGAAGGAAAGACATTTCGTGCATTATCTGAAAAAGAAAGGGAAGAAGTAGCTAAAAAAATAACAGTGATGGGGAGGTCTTCTCCTAACGACAAGCTTTTATTTGTTCAAGCACTGCGTAAAGGAGGAGAAGTTGTTGCTGTTACTGGAGATGGCACCAATGATGCTCCTGCGCTTCATGAGGCAGATATTGGTCTTTCCATGGGCATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTGCATCAGTAGTAAAGGTTGTCTGCTGGGGCCGTTCTGTATACGCAAATATTCAGAAATTTATACAGTTCCAGCTCACTGTTAATGTTGCAGCTCTTGTGATAAATGTTGTGGCGGCAGTATCGTCTGGTCATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTGGCACTGGCTACTGAACCGCCAACAAACCACCTTATGCGCAGAGCACCGGTTGGTCGAAGGGAACCTCTTATAACGAATATTATGTGGAGGAACTTGTTTGTACAGGCTGCGTATCAAATTACGATTCTCCTTGTTCTTAATTTCGCTGGAGAAAGTTTTCTACCTAAGAACGAGTCTCGAGCTTATACCACGGAACTGAATAATACTTTGATTTTCAATGCATTCGTCTTCTGCCAAATATTCAATGAGTTCAATGCTCGAAAACCAGATCAAATGAATGTGTTCAACGGAGTGACCAAGAACCGTCTCTTCATGGCAATCGTGGGAATTACTCTAGTGCTTCAGATAATCATCATTGAGTTCCTCGGAAAGTTCACCGACACGGTGAAGCTTAGTTGGCAGCTGTGGCTCGTTTCTATTGCTATTGGTATCGTCAGTTGGCCTCTTGCTATTGTTGGAAAACTCATTCCAGTTCCCAAAACACCACTGGGCCGCACGATTAAGAAGCACATTAGGCGGTTCAAGAGATGCAGATCTGCCGCACTATAG 3597 0.4423 MERREGGKSPIYNGPKSKGEWDILVILPRLKTVCVVDSIWSITGGEFHASIIQPSHSSCRLMFILAYTAISACCIASLTLPRLNLLKFPINSHEFETKSSSVLLSTKLLTEYGAPFRNGFLIMDPSTSRGSNSSTAGLLTVTIADGQNDNPLPPPISDVDDDDDVDFADPNDPFDVAHTKHAPVETLKRWREASLVLNPSRRFRYTLDFKKGEEEELAKGVIRSHAQVVRAALLFRLAGETDLGKGGTTPIPVDNYAVGLEQLVKGLSGSLKSDAEKGINGDDADMSQRRIAFGTNTYPRKKPKSILMFLWEAWQDLTLIILIIAAAVSLALGIKTEGLKEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQHLNSEKQNIQMEVIRGGRAKTISIFDIVVGDVVPLKIGDQVPADGVMITGHSLAIDESSMTGESKIVQKDHKSPFLMSGCKVADGVGVMLITGVGINTEWGLLMATISEDNGEETPLQVRLNGVATFIGTVGLTVAVFVLVVLLARYFTGNSKDLDGRVQFVAGQTKFSKAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSSTTICSDKTGTLTLNQMTVVEACVGKEKLNPPNDSSKFQPEVLSLINEGIAQNTTGTVFVPKDGGETEVSGSPTEKAILSWAVKLGMNFDLIRSNSTVLRVFPFNSEKKRGGVLLKQGDSGVRIHWKGAAEIVLDACTQYLDSNGCLQSIEKEKDFFKVAIDDMAARSLRCVAIAYRPYELHKVPSDEEELARWPLPETELILLTIVGIKDPCRPGVKEAVTVCTEAGVKVRMVTGDNIQTAKAIALECGILASHLDANEPTVIEGKTFRALSEKEREEVAKKITVMGRSSPNDKLLFVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVCWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGHVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMRRAPVGRREPLITNIMWRNLFVQAAYQITILLVLNFAGESFLPKNESRAYTTELNNTLIFNAFVFCQIFNEFNARKPDQMNVFNGVTKNRLFMAIVGITLVLQIIIIEFLGKFTDTVKLSWQLWLVSIAIGIVSWPLAIVGKLIPVPKTPLGRTIKKHIRRFKRCRSAAL 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g2035 1198 SUPERFAMILY Calcium ATPase, transduction domain A 381 477 IPR008250 -
Bisa10g2035 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 606 612 IPR018303 -
Bisa10g2035 1198 SMART Cation_ATPase_N_a_2 263 334 IPR004014 -
Bisa10g2035 1198 FunFam Calcium-transporting ATPase 802 956 - -
Bisa10g2035 1198 PRINTS Sodium/potassium-transporting ATPase signature 597 618 - -
Bisa10g2035 1198 PRINTS Sodium/potassium-transporting ATPase signature 723 741 - -
Bisa10g2035 1198 PRINTS Sodium/potassium-transporting ATPase signature 347 367 - -
Bisa10g2035 1198 FunFam Calcium-transporting ATPase 9 plasma membrane-type 458 628 - -
Bisa10g2035 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 266 1174 IPR023298 -
Bisa10g2035 1198 NCBIfam calcium-translocating P-type ATPase, PMCA-type 264 1174 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bisa10g2035 1198 Gene3D - 601 956 IPR023214 -
Bisa10g2035 1198 Gene3D - 614 811 IPR023299 GO:0000166
Bisa10g2035 1198 FunFam Calcium-transporting ATPase 614 811 - -
Bisa10g2035 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 610 816 IPR023299 GO:0000166
Bisa10g2035 1198 SUPERFAMILY HAD-like 602 1016 IPR036412 -
Bisa10g2035 1198 CDD P-type_ATPase_Ca_PMCA-like 287 1044 - -
Bisa10g2035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 428 442 - -
Bisa10g2035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 826 836 - -
Bisa10g2035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 935 947 - -
Bisa10g2035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 604 618 - -
Bisa10g2035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 804 815 - -
Bisa10g2035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 911 930 - -
Bisa10g2035 1198 Pfam E1-E2 ATPase 381 582 - -
Bisa10g2035 1198 Pfam Ca2+-ATPase N terminal autoinhibitory domain 171 213 IPR024750 GO:0005516
Bisa10g2035 1198 Gene3D - 183 236 - -
Bisa10g2035 1198 Pfam Cation transporting ATPase, C-terminus 996 1172 IPR006068 -
Bisa10g2035 1198 NCBIfam HAD-IC family P-type ATPase 877 994 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa10g2035 1198 NCBIfam HAD-IC family P-type ATPase 543 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa10g2035 1198 SFLD p-type atpase 586 963 IPR044492 -
Bisa10g2035 1198 Gene3D - 284 480 - -
Bisa10g2035 1198 Gene3D - 312 1163 - -
Bisa10g2035 1198 Pfam Cation transport ATPase (P-type) 660 738 - -
Bisa10g2035 1198 FunFam Calcium-transporting ATPase 312 369 - -
Bisa10g2035 1198 FunFam Calcium-transporting ATPase 359 480 - -
Bisa10g2035 1198 Pfam Cation transporter/ATPase, N-terminus 264 329 IPR004014 -
Bisa10g2035 1198 PANTHER CATION TRANSPORTING ATPASE 263 1174 - -
Bisa10g2035 1198 FunFam Calcium-transporting ATPase 928 1176 - -
Bisa10g2035 1198 SFLD Haloacid Dehalogenase 586 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g2035 Bisa-ChrBisa10 54019551 54039050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g2035 131 1196 Primary Pumps ATPases AT3G21180 72.258 0.0 1555