Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g2022 ATGAAGGACACGGAGAAAAAGAGGTTCCCCATTGGACCCGAGCATTATGAACTATTCGAGGAGGTTGGCACGGGTGTAAGTGCTTCTGTGCACCGTGCTCGCTGCATTCCCCTCAATGAGATCGTAGCTATCAAAATCCTAGATTTTGAGCGTGACAACTGCGATCTGAATAACATTTCTCGTGAAGCACTGACCATGATCTTGATTGACCACCCTAATGTCCTTAAATCACACTGCTCCTTTGTTAGTGACCATAATCTGTGGGTTGTCATGCCATACATGTCTGGTGGTTCCTGCCTTCACATATTAAAAGCTGCCTACCCAGATGGTTTTGAGGAGGTTGTAATAGCTACAATTTTGCGAGAGGTATTAAAAGGTTTAGAGTACCTTCATCATCATGGGCATATACATAGAGATGTCAAAGCTGGGAACATTCTAATTGATTCGCGTGGTGCAATCAAGCTTGGGGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAGCGTACAAGGAATACATTTGTGGGGACCCCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGACTTCAAAGCTGATATCTGGTCATTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAATATCCACCAATGAAGGTACTGCTTATGACATTGCAAAATGCACCCCCTGGCCTTGATTATGAAAGGGATAGGAAGTTCTCTAAGTCATTTAAGCAGATGATTGCTAGCTGCTTAGTAAAAGATCCTTCAAAACGACCCACTGCAAGTAAGTTGTTAAAGAATTCCTTCTTTAAGCAAGCTCGCTCAAATGATTATATTGCGCGAACACTTTTGGAGGGTCTGCCTGGTTTAGGTGATCGCATGAAGGCCCTAAAGAGGAAAGAAGAAGATATGCTTGCCCAAAAACAAATGCCTGATGGAGAGATGGAGGAATTATCACAGAATGAATACAAACGAGGAATTAGTGGCTGGAACTTTAATCTTGAAGATATGAAAGCTCAGGCTTCATTGGATTATGATGAATCTGAAAGCAGCTTAGGAGGAAGTTCAACTTTTTCTTCAACTGATGCACTAGAGAAGCAATCACCGAGTCCGAATACTTCTCAACTTGCAGATATGTTTCTAGCGCCAAATGCTTCAAAGGAAGATAATGGTGAGATGCAAAATCAATCAGCTTCTGTTCTAGTGATGGATTCCGCAGCAAGTGATGCCAAGGTTAGAAGTGAGAAATCTGATGATGATTCCAGTATCACCAGTTTTAGCTATGACCATCACTTTTCACAGTGCCCTTCTCTCCATCTTGATGATCATATCGTGGACCAGAATTTGGGTGAAAAATATGATATGGAGAATGGTGGGAGACAGGTGGAGGGCATGGCTATTAATTCTCATAATAGACGAGCTAATTCTGATGATGTGGATGAGAAAGCAAAGGTACCAGTAGTTCAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTCGACTTAGAAAAGGTCATTAGCCCACACAATCCAGCTCCTCTACCATCAGTTTTACCGTCATTGCAAGCATCTGAGGCTTCAACATCAAATCTTTATGGCTCTGCTCTTTTCTCAGTGTTGCATTCTATGCTGCTAACAAATATTCATCAAAGGGACAATATTTTATTTTTAATGAAGCAAATAACTGCTGGTGACTCTACAGCTGATGGAGCAGGCAACACAGCACAGAATGCGACTATTGAGAAATCTTTGCTTGAAGCATCTCATGACAGGGAAAGAGAGCTACTTCATGAGATAACTGAGTTGCAGAGGAGGCTCCTATATGCCCAGGAAGAGCTTAAAAAATCGAAAACAGAAACCAATCAGTTCCGGGTCCGGTTCTGGGCACAGTTCCGGGTAAGAGGGGTCCATCAATCAATGCTGAACAATGTTATTGGATCCGGAGATGAAACCTTTCAAAGTTCAAACAGAATGCTCTGGGAAGTGAATTACTTGCATCGGGTCGGGTTGTGCCCACGGATCTGGATTTGGACTTTTGGAGCCGCTAATGCCCAGCCATGTCATATTGTGCCATCACGCAAGAGAGACAGAGTGGCAGAGTTGTCAAGGGATAGGTCGTGGAAGATGTCGAGGGATAAGGCGCGGGAGATTTCCAGGGAAATGGTGCATGTGGAGCACCGAATGGGCGCCAGTGGCCTCGAGAAGATCATTCTCAGAGAATGTCGAGGCTCTTCTGCCGAGGTGTATCTATATGGGGGTCAAGTTACATCTTGGAAGAATGATCTTGGAGAAGAGTTGCTCTTTGTTAGTAGTAAGGCTAATTTTAGGCCTCCAAAAGCTATACGTGGAGGTATCCCTATTTGTTTTCCTCAGTTTTCAAATTTTGGCCCACTTGAAAGCCATGGATTTGCAAGGAACAGGCTCTGGACCTTAGATCCTAATCCCCCGCCATTTCCAACAGTTAACACCAATAAGGCTTTCATTGATTTGCTTCTTAAGAACTCTGAAGACGATACAAAGATTTGGCCTCACAGATATGAGTTTCGTCTGAGGATATCTCTGGGCCCTGGGGGAGATTTGATGTTGACATCCCGTATTCGAAACACAAACACAGATGGGAAATCATTTACCTTCACATTTGCCTATCAGACATATTTATATGTTACTGACGTCAGTGAAGTGCGGGTAGAAGGTCTTGAGACACTAGATTATCTGGACAACTTGAAGAATAGACAAAGGTTTACTGAACAAGGGGATGCGATAACATTTGAGTCTGAGGTGGATAAAGTATACTTAGGTACCCCTACAAAAATTGCTATAATTGACCATGAAAGGAAAAGAACTTTTGTATTGAAGAAAGATGGGCTTCCAGATGCCGTGGTATGGAACCCATGGGACAAGAAAGCAAGGGGTATACCTGATCTTGGGGACGATGACTACAAGCACATGCTGTGTGTTCAGGCTGCTAGTATAGAAAAACCAATCACTCTAAAACCTGGAGAAGAATGGAAAGGGAGGCAAGAAATATCTGCAGTTCCTTCCAGTTATTGCAGTGGTCAACTTGACCCACAGAAATTACTTCTTTATGGCTATTAG 3120 0.4327 MKDTEKKRFPIGPEHYELFEEVGTGVSASVHRARCIPLNEIVAIKILDFERDNCDLNNISREALTMILIDHPNVLKSHCSFVSDHNLWVVMPYMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPTASKLLKNSFFKQARSNDYIARTLLEGLPGLGDRMKALKRKEEDMLAQKQMPDGEMEELSQNEYKRGISGWNFNLEDMKAQASLDYDESESSLGGSSTFSSTDALEKQSPSPNTSQLADMFLAPNASKEDNGEMQNQSASVLVMDSAASDAKVRSEKSDDDSSITSFSYDHHFSQCPSLHLDDHIVDQNLGEKYDMENGGRQVEGMAINSHNRRANSDDVDEKAKVPVVQQRGRFKVTSENVDLEKVISPHNPAPLPSVLPSLQASEASTSNLYGSALFSVLHSMLLTNIHQRDNILFLMKQITAGDSTADGAGNTAQNATIEKSLLEASHDRERELLHEITELQRRLLYAQEELKKSKTETNQFRVRFWAQFRVRGVHQSMLNNVIGSGDETFQSSNRMLWEVNYLHRVGLCPRIWIWTFGAANAQPCHIVPSRKRDRVAELSRDRSWKMSRDKAREISREMVHVEHRMGASGLEKIILRECRGSSAEVYLYGGQVTSWKNDLGEELLFVSSKANFRPPKAIRGGIPICFPQFSNFGPLESHGFARNRLWTLDPNPPPFPTVNTNKAFIDLLLKNSEDDTKIWPHRYEFRLRISLGPGGDLMLTSRIRNTNTDGKSFTFTFAYQTYLYVTDVSEVRVEGLETLDYLDNLKNRQRFTEQGDAITFESEVDKVYLGTPTKIAIIDHERKRTFVLKKDGLPDAVVWNPWDKKARGIPDLGDDDYKHMLCVQAASIEKPITLKPGEEWKGRQEISAVPSSYCSGQLDPQKLLLYGY 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g2022 1039 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g2022 1039 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bisa10g2022 1039 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 626 IPR047173 GO:0043539
Bisa10g2022 1039 MobiDBLite consensus disorder prediction 352 383 - -
Bisa10g2022 1039 Gene3D - 740 1024 IPR014718 GO:0030246
Bisa10g2022 1039 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g2022 1039 SUPERFAMILY Galactose mutarotase-like 744 1017 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bisa10g2022 1039 Coils Coil 593 627 - -
Bisa10g2022 1039 CDD D-hex-6-P-epi_like 751 1018 IPR025532 -
Bisa10g2022 1039 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Bisa10g2022 1039 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g2022 1039 Pfam Aldose 1-epimerase 744 1017 IPR008183 GO:0005975|GO:0016853
Bisa10g2022 1039 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Bisa10g2022 1039 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Bisa10g2022 1039 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Bisa10g2022 1039 Gene3D Transferase(Phosphotransferase) domain 1 97 329 - -
Bisa10g2022 1039 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g2022 Bisa-ChrBisa10 53871225 53886427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g2022 5 613 MAP Kinase Kinase Kinase Kinase AT1G79640 57.742 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Bisa10g2022 Aldose_epim 3.8e-62 CL0103