Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g2014 ATGTCATTCTCATTGCTAAGGAGCAGTTTCAGCCCATACAACATGGTTTTCTTGGGGGCATTAATGTTCTTCTTCCTCTTACTTCATCACCCAGTTACAACTTTCAGTCTCTCATTTCCAAGGCATCATCACTACCCTTCTCATTCTCTGCTTACAGACAAGGCTGCTCTTCTGAAGTTCAAGAAAACAATCACATCTGATCCACATTCTGCACTGGCCAACTGGGATGAAGCTGTTCATGTCTGCAATTTCACTGGGGTTACATGCGATGCTTTCCAGCACCGAGTCAGACAAGTAATCTTGAATGAAACTTGTCTTGTGGGGCTGCTCTCACCTTTCCTATCCAATCTCACTGGCCTGCACATCCTTGACATTGTTGACAACCACTTATCTGGCGTTATTCCACCTGAATTCTCCTCCCTCAGGCGGCTCCAACGCCTCCGGCTCATGGGGAACAACCTGCATGGCTCCATACCAGAGTCCTTTTCCCAGCTTTCCAGACTCAAAGTGCTGCATATCAAAGAATGTAACATTACTGGTTCACTTCCTCCATCTCTCTTCTCCAATTGCACTCTACTGGAAATAGTGGACCTTTCTGGAAACTTCCTCACTGGTAAGATCCCAGAAGTGATTGGAAACTGTCTTGGCCTGTGGAGTCTCAGTCTGTACAATAATCAATTTACTGGACATCTTCCTCTCTCTTTGACTAATCTATCACTTGGAAACTTAGACGTGGAGTATAATCATTTGGCTGGTGAATTGCCTTTAGAGTTTATAACCAGTTGGCCTGAACTTCAGTATCTACATTTATCATACAACAATATGGTAAGTCATGATAGTAATACCAATCTTGATCCATTTTTTGCTACTCTTAGAAACTGCAGCATTCTAGAGGAGCTTGAATTGGCTGGCATGGGCCTTGGGGGAAGGTTCTCCAGTACTGTCAGTCAAGCTGGGATCAAACTAAGAAGTCTACTGCTGCAGGAAAACCAAATTTATGGATCAATTCCTCATAGTGTATCAAATCTCTCCAGCCTTTTGATTCTGAATTTAACATCCAATCTTCTAGATGGAACCATTTCACCAGAGATCAGCAAGTTGTCAAACTTGGAACAACTTTTCTTATCATATAACCATTTCAGAACTGCAATTCCAGAGGCACTGAGCAACTGTTCACATCTGGGTTTGCTAGATCTGTCACAAAATGAGTTCTCAGAAGGAATTCCAGAAAGTTTAGGAAATTTGGTTCGACTAAGTTCTTTGTTTCTCAACAACAACCATCTCACAGGAAAAATACCTTCTACATTAGGACAGTGCATTGATCTGTACAGGCTTGACTTGTCCTATAATAGGTTAACAGGAAGCATCCCGCCTGAACTCTCAGGCCTGCATGAAATTAGAATTTTCATCAATCTATCACATAACCAGCTTGAAGGTCCCTTGCCAATTGAGCTCAGCAAACTAGACAAGGTTCAAGAGATGGATTTTTCATCAAATTACCTAAATGGAACCATCTTCCCTCAGATAGCAGGCTGCATTGCTGTGTCGTTGATAAATCTGTCAAACAATTTTCTAGAAGGTGAGCTTCCAGAAACCTTAGATGAACTGAAGAACCTCGAATCTTTTGATGTTTCATGGAACGGATTGTCTGGATTGATCCCCAAAACTCTAAGTAAAATTGACACACTTACTTTCCTCAATCTATCATTTAACAACCTAGAAGGAGTGGTTCCATCTGGTGGTATTTTTAATTCAGCATCAAATTTATCATTCTTAGGAAACCCACATCTTTGTGGGGCAGTTACAGGCAATTTTTCTTGTTCTCATAGGAGACAGTGGCTCCACAGTCGCTTGTCCCTGATTATATTTGTCTTAGTCATCTCCATATCATCATTCTTGTCAACGATTTGCTGCGTATTGGGATGTAGGCGTCTTAAAGTGATTATTTCCTCTCAAGGGACTCAAGTAGGTAGAAAACCAGCTAGACTTGAGCTGACATGTAACTTCCCAAGAATCACATATGAGGAACTATCAGAGGCCACTGGAGGATTTGATGACCAAAGACTAATTGGAACAGGTGGCTATGGACATGTCTACAAGGGAGTTCTTCCAGATAAGACACCAATAGCAGTCAAGGTGCTGCATTTGCAGTCTGGAAACTCCACCAAGAGCTTCAATAGAGAATGCCAAGTTTTAAAGAGGATTCGACACAGGAACCTGATAAGGATTATCACTGCATGTAGTTTACCTGATTTCAAGGCCCTTGTTTTGCCTTACATGGCCAATGGGAGCTTGGAGAGCCGCCTCTATGCTTCTTCTGGGTCTTCTGACCTCAGTATCATCCAGAGGGTGAACATTTGTAGCGACATAGCTGAAGGGATGGCCTATCTGCATCATCATTCTCCAGTCAGAGTCATACACTGTGATCTAAAACCAAGCAATGTTCTTCTTAATGATGACATGACAGCTCTAGTTTCGGATTTTGGGATTGCAAGGTTAGTTATGAGTGCTGGAGTTAATGATAACATGGGGACCTCCACTGCAAATTTGTTATGTGGATCCGTTGGATACATTGCACCAGAGTATGGATTTGGGTCAAATACATCTACAAAAGGAGATGTTTACAGCTTTGGCATTCTTGTTCTTGAGGTGGTAACAAGAAAAAGGCCGACAGATGACATATTTGCAGGTTGTTTAAGCCTACACAAATGGGTGAAAATTCATTATCATGGAAGGGTAGAGAAGGTGATAGACCCTGCTTTGGTGTCGGCTTCGAGAGATCAGTCGCCGGAAGTGAAAGGAATGTGGGAAGTTGCAATTGCAGAGTTAATAGAGCTAGGGATCCTTTGCACTCAAGAATCACCTTCTACAAGGCCTACCATGCTTGATGCAGCAGATGACTTGGATCGTCTCAAGAGATACCTTGCTGGGGACACAACTAGGACTTTTGCCTCATCTCTTGGATTTTCATTTTCTACGATAGGTGATTATTGA 2994 0.4228 MSFSLLRSSFSPYNMVFLGALMFFFLLLHHPVTTFSLSFPRHHHYPSHSLLTDKAALLKFKKTITSDPHSALANWDEAVHVCNFTGVTCDAFQHRVRQVILNETCLVGLLSPFLSNLTGLHILDIVDNHLSGVIPPEFSSLRRLQRLRLMGNNLHGSIPESFSQLSRLKVLHIKECNITGSLPPSLFSNCTLLEIVDLSGNFLTGKIPEVIGNCLGLWSLSLYNNQFTGHLPLSLTNLSLGNLDVEYNHLAGELPLEFITSWPELQYLHLSYNNMVSHDSNTNLDPFFATLRNCSILEELELAGMGLGGRFSSTVSQAGIKLRSLLLQENQIYGSIPHSVSNLSSLLILNLTSNLLDGTISPEISKLSNLEQLFLSYNHFRTAIPEALSNCSHLGLLDLSQNEFSEGIPESLGNLVRLSSLFLNNNHLTGKIPSTLGQCIDLYRLDLSYNRLTGSIPPELSGLHEIRIFINLSHNQLEGPLPIELSKLDKVQEMDFSSNYLNGTIFPQIAGCIAVSLINLSNNFLEGELPETLDELKNLESFDVSWNGLSGLIPKTLSKIDTLTFLNLSFNNLEGVVPSGGIFNSASNLSFLGNPHLCGAVTGNFSCSHRRQWLHSRLSLIIFVLVISISSFLSTICCVLGCRRLKVIISSQGTQVGRKPARLELTCNFPRITYEELSEATGGFDDQRLIGTGGYGHVYKGVLPDKTPIAVKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESRLYASSGSSDLSIIQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIARLVMSAGVNDNMGTSTANLLCGSVGYIAPEYGFGSNTSTKGDVYSFGILVLEVVTRKRPTDDIFAGCLSLHKWVKIHYHGRVEKVIDPALVSASRDQSPEVKGMWEVAIAELIELGILCTQESPSTRPTMLDAADDLDRLKRYLAGDTTRTFASSLGFSFSTIGDY 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g2014 997 SMART LRR_typ_2 141 164 IPR003591 -
Bisa10g2014 997 SMART LRR_typ_2 536 559 IPR003591 -
Bisa10g2014 997 SMART LRR_typ_2 367 391 IPR003591 -
Bisa10g2014 997 SMART LRR_typ_2 165 189 IPR003591 -
Bisa10g2014 997 SMART LRR_typ_2 415 439 IPR003591 -
Bisa10g2014 997 Pfam Protein kinase domain 685 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g2014 997 CDD STKc_IRAK 690 971 - -
Bisa10g2014 997 Pfam Leucine Rich Repeat 538 559 IPR001611 GO:0005515
Bisa10g2014 997 Gene3D Ribonuclease Inhibitor 241 609 IPR032675 -
Bisa10g2014 997 SUPERFAMILY Protein kinase-like (PK-like) 664 968 IPR011009 -
Bisa10g2014 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 664 759 - -
Bisa10g2014 997 Gene3D Ribonuclease Inhibitor 52 164 IPR032675 -
Bisa10g2014 997 Gene3D Ribonuclease Inhibitor 165 240 IPR032675 -
Bisa10g2014 997 ProSiteProfiles Protein kinase domain profile. 684 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g2014 997 SMART serkin_6 684 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g2014 997 SUPERFAMILY L domain-like 321 599 - -
Bisa10g2014 997 Pfam Leucine rich repeat N-terminal domain 52 90 IPR013210 -
Bisa10g2014 997 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 289 969 - -
Bisa10g2014 997 Pfam Leucine rich repeat 368 428 IPR001611 GO:0005515
Bisa10g2014 997 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Bisa10g2014 997 SUPERFAMILY L domain-like 51 304 - -
Bisa10g2014 997 ProSitePatterns Protein kinases ATP-binding region signature. 690 712 IPR017441 GO:0005524
Bisa10g2014 997 Gene3D Phosphorylase Kinase; domain 1 665 759 - -
Bisa10g2014 997 FunFam Leucine-rich repeat receptor-like protein kinase 51 209 - -
Bisa10g2014 997 Gene3D Transferase(Phosphotransferase) domain 1 760 983 - -
Bisa10g2014 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Bisa10g2014 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 760 981 - -
Bisa10g2014 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 321 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g2014 Bisa-ChrBisa10 53759447 53762662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g2014 52 958 Receptor kinase-like Gene Family AT3G47570 34.391 1.09e-157 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa10g2014 Pkinase 1.9e-41 CL0016