Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g2009 ATGGGGGTATACCTTAGCAGCCCGAAAACAGAGAAGGCCTCTGAAGATGGTGAGAATGACAGGCTTCGCTATGGTTTATCTTCTATGCAGGGGTGGCGTACAACCATGGAAGATGCGCATGCAGCCCATCCTGATTTAGATGAGTCTACATCTTTCTTTGGTGTTTTTGATGGCCATGGAGGTAAAGCAGTTGCTAAATTCTGTGCCAAGTATCTACACCAAGAGGTGCTTAAGCATGACGCTTATTTAGCTGGAGATACAGGCACATCTTTACAAAAATCTTTTCTCAGAATGGATGAGATGATGAGTGGACAAAGAGGTTGGAGAGAATTAGCAGTCTTGGGAGAAAAACCAAAAAGGTTCTCTAGTATGCGAGGGTGGTTTATATGGTCTCCCAAGAGTGGTGCAGTCAATCGCCAAGATGACTGGGCTTTTGAGGAGGGGCCCCATTGTGGTTTCAGGGGACCAAATGCTGGATGCACGGCCTGTGTTGCAGTCATCCAAGGGAACCAACTTATTGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAAGGGCCAGGCACAGAATTTAACTAAAGATCACAAGCCTGACCTTGAGATTGAGAGAGACAGAATTCTAAAAGCTGGTGGTTTTATCCAATTTGGACGGGTCAATGGAACTTTAAACTTGGCTAGAGCAATTGGAGATGTAGAATTCAAGGGAAACAAGCATTTGCCTGCTGAAAAGCAGATTATAACTTCTGATCCAGACATAACTTCTGTTGAGCTTTGCAACGATGATGAGTTTCTTGTAATAGCTTGTGATGGGATATGGGACTGCATGACAAGCCAAGAGCTTGTGGACTTCATACATGAACAGTTAAAGACAGAGAATAAACTCAAAGTGATTTGTGAAAGAGTATTTGATTTTTGCTTGGCACCTGCAGCTGGTTGTTTGGGATGTGACAACATGACCATGATCTTGATTCAGTTCAAAAGGCCTTCAAATCCTGGTGCTTCTTCTGTTGATACATAA 1023 0.434 MGVYLSSPKTEKASEDGENDRLRYGLSSMQGWRTTMEDAHAAHPDLDESTSFFGVFDGHGGKAVAKFCAKYLHQEVLKHDAYLAGDTGTSLQKSFLRMDEMMSGQRGWRELAVLGEKPKRFSSMRGWFIWSPKSGAVNRQDDWAFEEGPHCGFRGPNAGCTACVAVIQGNQLIVANAGDSRCVLSRKGQAQNLTKDHKPDLEIERDRILKAGGFIQFGRVNGTLNLARAIGDVEFKGNKHLPAEKQIITSDPDITSVELCNDDEFLVIACDGIWDCMTSQELVDFIHEQLKTENKLKVICERVFDFCLAPAAGCLGCDNMTMILIQFKRPSNPGASSVDT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g2009 340 CDD PP2Cc 23 327 IPR001932 -
Bisa10g2009 340 Gene3D - 1 328 IPR036457 -
Bisa10g2009 340 SMART PP2C_SIG_2 28 327 IPR001932 -
Bisa10g2009 340 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bisa10g2009 340 MobiDBLite consensus disorder prediction 1 20 - -
Bisa10g2009 340 SMART PP2C_4 13 325 IPR001932 -
Bisa10g2009 340 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Bisa10g2009 340 ProSiteProfiles PPM-type phosphatase domain profile. 23 327 IPR001932 -
Bisa10g2009 340 FunFam probable protein phosphatase 2C 60 1 328 - -
Bisa10g2009 340 Pfam Protein phosphatase 2C 156 312 IPR001932 -
Bisa10g2009 340 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bisa10g2009 340 PANTHER PROTEIN PHOSPHATASE 2C 17 326 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g2009 Bisa-ChrBisa10 53676801 53683646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g2009 1 336 PP2C-type Phosphatase Gene Family AT2G25070 70.118 0.0 510