LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa10g2005	ATGGAAGACCTCAAAGAGCGGCTACTCCTACAAAAACCTGCATCAGCTCTTAATGTGAGAGAATCAGTCAATCGACCGTCAGCATCTGGAAGACAACCCTTTCTAGGTGTGGATGTTTTGGGGCTAAAGAAGCGAGGTCAAGGTCTCCGGTCATGGATTCGTGTTGACACATCTGGAAACTCCCAGGTCATTGAGGTAGATAAGTTCACTATGATGCGACGCTGTGACCTACCTGCACGTGATCTTCGCCTACTTGATCCTCTGTTTGTTTACCCGTCAACAATTCTTGGTAGAGAAAAGGCTATTGTTGTAAATCTCGAGCAGATACGGTGTATTATAACAGCAGATGAGGTTCTTCTCTTGAATTCCCTAGATAGTTATGTATTGCACTATGTGATGGAGCTGCAACGCCGACTAACTACAGCTGGGGTAGGTGAAGTTTGGCAGCCGGACAATCCTGACATGAGCCGAAGGAGAGGAAGTAGGAGTTTCGACAATGCCTTTAGCAACACATCTCCTGATTATTTGCCTTTCGAGTTCAGGGCTCTTGAAGTTGCCTTGGAGGCGGCATGCACATTTCTTGACTCTCAGGCTGCAGAGTTAGAAATCGAAGCATATCCATTACTAGATGAATTAACATCAAAGATCAGTACACTAAATTTAGAACGTGTTCGTCGGTTGAAAAGTAGACTTGTTGCCCTAACTAGGAGAGTTCAAAAGGTTAGAGATGAAATAGAGCAGCTAATGGATGATGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGGCGGATGGAATCATCATTTTATGGTGATCATCAGTCTTTGATGGGATATAGATCAATCGATGGTGCATCCATTTCTGCTCCAGTTTCTCCGGTTTCATCGCCTCCCGATGCTCGGAAGATTGAGAAGTCTCTCAGCATTGCAAGGAGTCGACATGAGAGCATGAGGAGTACAGAAAGTGCTACAGAAAGTATAGAAGAGCTTGAGATGTTGCTAGAAGCATACTTTGTTGTAATTGACAGCACCCTCAACAAGCTGACATCGTTGAAAGAGTACATTGATGACACAGAAGATTTTATTAACATCCAACTGGATAATGTGCGTAACCAGCTTATCCAGTTTGAGCTTTTGCTCACCACGGCAACATTTGTGGTCGCTATCTTCGGTGTAGTGGCCGGAATTTTTGGGATGAATTTTGAAATCCCATTATTTGATGTACCCTCTGCATTCCAGTGGGTGCTTATAATTACAGGAATCTGTGGGATCTGCATATTCTGTGCGTTTGTGTGGTTCTTCAAGTACAGAAGGCTGATGCCCCTATAA	1335	0.4375	MEDLKERLLLQKPASALNVRESVNRPSASGRQPFLGVDVLGLKKRGQGLRSWIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTAGVGEVWQPDNPDMSRRRGSRSFDNAFSNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMESSFYGDHQSLMGYRSIDGASISAPVSPVSSPPDARKIEKSLSIARSRHESMRSTESATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDVPSAFQWVLIITGICGICIFCAFVWFFKYRRLMPL	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa10g2005	444	Pfam	CorA-like Mg2+ transporter protein	333	436	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Bisa10g2005	444	SUPERFAMILY	Magnesium transport protein CorA, transmembrane region	381	434	IPR045863	-
	Bisa10g2005	444	FunFam	Magnesium transporter MRS2-1	382	442	-	-
	Bisa10g2005	444	Gene3D	Magnesium transport protein CorA, transmembrane region	382	442	-	-
	Bisa10g2005	444	CDD	Mrs2_Mfm1p-like	52	441	IPR039204	-
	Bisa10g2005	444	FunFam	Magnesium transporter MRS2-1	40	123	-	-
	Bisa10g2005	444	Gene3D	Magnesium transport protein CorA, transmembrane region	130	375	-	-
	Bisa10g2005	444	Coils	Coil	224	251	-	-
	Bisa10g2005	444	Gene3D	-	40	123	-	-
	Bisa10g2005	444	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	26	442	IPR039204	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa10g2005	Bisa-ChrBisa10	53656638	53659751	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa10g2005	1	444	MRS2 Gene Family	AT1G16010	86.742	0.0	760