Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1988 ATGGATAACCGTTCTTCGTGGATTAACACTTCCTTGGACCTCAACATCAACCCCAGTGCCAGAGTTCACGAGGATGTTCCTGCGATTCAGAAAAAGGAGTTGTTCGGGTTGGAATTGAAGTCTCCTGCGAAACAAGAGTCAAGCAGTGAGTTGAAGGAGGAGCTGAAGAGGGTGAGTGCAGAGAACGAGAAGTTGACTGAAATGCTGACAAAGATGTGTGAGAATTACAACACCTTGAGAAGCCACTTGACGGAGTATATGAGGAAGAATCCAGAAAAGGAGCAAAGCCCATCGAAGAAGAGGAAGTCTGAGAGCAGCAATAACAACAGCAATCTGATTGGGGCTAATGGAAACTCTGAGAGCAGCTCAACTGATGGAGAAGAATCAAACAAGAAACCAAGGGAAGAGATCATCAAAGCGAAGATCTCTAAACTTTATGTCAGGACAGAAGCTTCTGATACGAGCCTTATTGTGAAGGATGGATATCAGTGGAGAAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCAAGGGCATACTTCAAATGCTCTTTTGCTCCAGCATGCCCTGTGAAGAAGAAGGTCCAAAGAAGTGTAGAGGATCAATCTGTTTTGGTGGCAACTTATGAAGGAGAACATAATCATCCAAAGCCTTCTCAGATGGAAGCAACATCAGGTTCTAGCCGTAGTGTGACACTTGGTGTGGCACCATGTTCATCATCTATGAGCCCTTCTCCTCCTGCTAAAGTTACAATTGGCATGACAAAATCCAAGTCCTTCAACGAACCGAAGAATCCGAAACCGAAGCTTGATTCGCCGGAAGTACCCCAGGTTTTGGTGGAACAGATGGCCACTTCCTTAACCAAGGATCCAAGTTTCAGAGCAGCACTTCTTGCAGCCATCTCGGGGAGAATGTTGCATAATAATTAG 933 0.4523 MDNRSSWINTSLDLNINPSARVHEDVPAIQKKELFGLELKSPAKQESSSELKEELKRVSAENEKLTEMLTKMCENYNTLRSHLTEYMRKNPEKEQSPSKKRKSESSNNNSNLIGANGNSESSSTDGEESNKKPREEIIKAKISKLYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPACPVKKKVQRSVEDQSVLVATYEGEHNHPKPSQMEATSGSSRSVTLGVAPCSSSMSPSPPAKVTIGMTKSKSFNEPKNPKPKLDSPEVPQVLVEQMATSLTKDPSFRAALLAAISGRMLHNN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1988 310 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 43 306 IPR044810 GO:0003700
Bisa10g1988 310 Coils Coil 48 75 - -
Bisa10g1988 310 MobiDBLite consensus disorder prediction 38 60 - -
Bisa10g1988 310 MobiDBLite consensus disorder prediction 102 124 - -
Bisa10g1988 310 MobiDBLite consensus disorder prediction 88 135 - -
Bisa10g1988 310 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g1988 310 FunFam WRKY transcription factor 40 143 220 - -
Bisa10g1988 310 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g1988 310 MobiDBLite consensus disorder prediction 45 60 - -
Bisa10g1988 310 Gene3D WRKY domain 142 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g1988 310 SUPERFAMILY WRKY DNA-binding domain 155 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g1988 310 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g1988 310 MobiDBLite consensus disorder prediction 219 262 - -
Bisa10g1988 310 MobiDBLite consensus disorder prediction 211 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1988 Bisa-ChrBisa10 53290421 53291640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1988 5 310 WRKY Transcription Factor Family AT1G80840 52.848 1.84e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa10g1988 WRKY 5.6e-23 CL0274