Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1984 ATGGCTGAACAGAACTTGCAGAACGACGCCGTCTCCCCTCCGAGGAAAATTCTCTTCAACAAGTACGAGATGGGGAGGCTCCTGGGTCAAGGGAACTTCGCGAAGGTGTATTACGGTAGAAATCTCTCCACAAACGAGAGCGTGGCGATCAAGGTGATCAAGAAGGAGAAGCTCAAGAAGGAGAGGCTCGTGAGGCAGATCAAGCAAGAAGTCTCTGTGATGCGACTGGTGCGTCACCCCCACATCGTGGAGCTGAAGGAAGTCATGGCCACCAAAGGAAAGATCTTTCTGGTCATGGAGTACGTCAAGGGTGGGGAATTGTTTTCGAAAGTCGCGAAAGGCAAGCTGAAAGAAGACGTGGCGAGGAAGTATTTCCAGCAATTGATCAGCGCCGTTGATTTCTGTCACAGCCGTGGAGTCACGCACCGTGACTTGAAGCCGGAGAATCTGCTTTTGGACGAGAACGAAGATCTCAAAGTCTCCGACTTCGGGTTGTCGGCGTTGCCGGAGCAACGCCGATCCGACGGAATGCTCGTCACGCCGTGTGGGACGCCGGCTTACGTGGCGCCGGAGGTTCTGAAGAAGAAAGGGTATGACGGGTCGAAAGCGGATATTTGGTCATGCGGGGTGATTCTCTATGCTTTGCTTTCTGGGTATCTGCCATTTCAAGGTGAGAATGTTATGAAGATTTACAAGAAGGCGTTCAAGGCTGATTATGAATTCCCAGCTTGGATCTCAGAAGGTGCCAAGAATATGATCTCTAAACTCCTCGTTGTGGACCCAGAAAAGAGATATTCCATGTCAGATATCATGCAGGACCCATGGTTTCAAATTGGGTTCATGAGACCCATTGCGTTTTCGATAAAGGAAGAGGAGGAATCAGCATTCGATTTCAATGAGGAAGAGAATAAAGACAAGGAAGAATCACATGTTGTGAGAGCAGTGACGCCATCTCGCCCATTTTACAATGCGTTTGAGATAATTTCTTCTCTATCAAACGGGTTTGATCTGAGAAGCCTGTTCGAGACAAGCAAGAGATCCCCGTCGATGTTTCTGTCGAAGTTCTCAGCTCCGGCGGTGGTGACGAAGCTGGAGACGGTGGCGAAGAAGCTGAACTTCAGGATCACAGGGAAGAAGGACTTCAAGGTGAGGATGCAGGGGGGAACAGAGGGAAGAAAGGGGAGGCTGGCGATGACGGTGGAGGTGTTCGAGTTGGCGCCGGAGGTGGCGGTGGTGGAGTTCTCCAAGTCGGCCGGAGACACACTGGAGTATGTCAAGTTCTGTGAGGACGAGGTGAGGCCTGCGCTCAAAGACATCGTGTGGAGCTGGCAAGGAGACAGCAATAACGGTCATCAGGCTGTTTCAGATTAG 1371 0.5113 MAEQNLQNDAVSPPRKILFNKYEMGRLLGQGNFAKVYYGRNLSTNESVAIKVIKKEKLKKERLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMKIYKKAFKADYEFPAWISEGAKNMISKLLVVDPEKRYSMSDIMQDPWFQIGFMRPIAFSIKEEEESAFDFNEEENKDKEESHVVRAVTPSRPFYNAFEIISSLSNGFDLRSLFETSKRSPSMFLSKFSAPAVVTKLETVAKKLNFRITGKKDFKVRMQGGTEGRKGRLAMTVEVFELAPEVAVVEFSKSAGDTLEYVKFCEDEVRPALKDIVWSWQGDSNNGHQAVSD 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1984 456 FunFam Non-specific serine/threonine protein kinase 14 101 - -
Bisa10g1984 456 FunFam Non-specific serine/threonine protein kinase 15 314 - -
Bisa10g1984 456 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1984 456 Gene3D Kinase associated domain 1, KA1 325 442 - -
Bisa10g1984 456 SUPERFAMILY Protein kinase-like (PK-like) 18 277 IPR011009 -
Bisa10g1984 456 Gene3D Transferase(Phosphotransferase) domain 1 15 324 - -
Bisa10g1984 456 FunFam Non-specific serine/threonine protein kinase 317 441 - -
Bisa10g1984 456 ProSiteProfiles NAF domain profile. 317 342 IPR018451 GO:0007165
Bisa10g1984 456 Coils Coil 50 70 - -
Bisa10g1984 456 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 437 - -
Bisa10g1984 456 Pfam NAF domain 321 376 IPR004041 GO:0007165
Bisa10g1984 456 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
Bisa10g1984 456 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1984 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Bisa10g1984 456 CDD CIPK_C 323 437 - -
Bisa10g1984 456 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1984 Bisa-ChrBisa10 53187958 53189328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1984 16 456 CBL-interacting serine-threonine protein kinases AT5G25110 62.812 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa10g1984 Pkinase 2.7e-77 CL0016