Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1981 ATGCAAGTGGATGTATCCCGCATATTCATACAAACCTTACTTGGCTTCCATCACCCTCATGGTCTTATGACCATTAGGGAGAAGTATCATGTAGAGGGTTATTTTCTCTTGATGCGAATTGGTGGAGCAGGTTACCAAACTTACTTTGTTGGGAAAAAGTTTAAATTGGCCAAATGGCGTCGTTTTCGACTTCTTTTCCTTTGGAGTAAGTTATCGATGGATTTGTTCCTCATCCTCATTCCTGATTTGCCTTCTGAGAATTTTTCTCCCATCCTCATCCTTACTCCAGCCACAAATGTGCAGAAAGGAACAAGACAAGAGAATATGGCTGTCACAGGTTCAACATCTGGACAGCCTCAATTCATTGCCAGCACTGGGAATCGAAGCTCTTCCAATGCACCACTCATCGAAAACTCAGAAACTGATCAAATTGTTGTCCCTGATAGGGCAAGCTGGAAAAACTTATTTTCATATATGGGCCCTGGTTTTCTTGTTTCCATCGCATATATAGATCCCGGAAACTTTGAAACCGACCTTCAGGCAGGAGCACAATATAAATATGAGTTACTTTGGATCATATTGGTTGCTTCCTGTGCTGCTCTTATAATTCAATCAATGGCAGCCAATTTGGGAGTTGTTACTGGGAAGCATTTAGCAGAGCATTGTAGAACTGAATATCCTCGGTCAACAAACTTCATACTATGGGTTATCGCTGAAATTGCCATAGTTGCCTGCGACATTCCTGAAGTAATTGGAACAGCCTTTGCATTGAACATGCTCTTCAAGATACCTGTTTGGATTGGTGTACTTCTGACAGGACTCAGTACTTTGATCCTCTTAGCGTTACAGCAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTGGTACTTACAATAGCCGTGTGCTTTTTCATGGAGCTTGGGTATGCAAAGCCTGATGCCGAGGAAGTTTTGGAGGGTCTTTTTGTGCCAAAACTCAAAGGGAGTGGTGCTACCGGCCTTGCAATTTCTCTTCTTGGTGCTATGGTTATGCCGCACAATCTTTTCCTCCACTCAGCACTGGTGCTCTCTAGAAAAATTCCACGATCAGTTCATGGAATCAAAGAGGCTTGCAGATTTTACATGGTAGAAAGTGCCTTTGCTCTTATGGTGGCCTTCCTCATAAATATTTCTGTTATTTCTGTGAGTGGCGCAGTTTGCAATTCTTTGAATTTGAATCCTGAAGATCAGGCAAGCTGTGAGGATTTGGACCTGAACAAAGCCTCCTTTCTTCTAAAAAATGTCTTGGGTAAGTGGAGTTCGAAACTGTTCGCAATTGCTCTGCTTGCATCGGGTCAAAGTTCTACAATAACAGGAACATATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGGCTTACGCCATGGATTCGAAACCTTTTAACTCGTTGTTTAGCCATAGTTCCTAGTTTGATTGTTGCTGTCATTGGTGGCTCTGCTGGGGCTGGGAAACTCATAATTATTGCCTCAATGATCTTATCATTTGAGCTTCCTTTTGCTTTGATTCCACTCCTCAAGTTCACCAGCAGCGATACGAAGATGGGAGCGTACGTCAACTCTAAGACGATTTCAGCTGTGACTTGGATCATCGGTTCCCTCATAATGGCCATAAATATATACTATTTACTGACTGGCTTCATCAAGTTGCTTCTTCATAGCCACGTGGAGATCGTGGGGAAGGTGTTTCTGGGGATTTTAGGATTTTCAGGTATAGCGATGTATTTGGCTGGTATTGCATATCTGGTGTTTCGCAAAAACCGGGAGGCCACACACCTTCTGGCACTAACTACACCTGAAAGTAGGCAGATGGAAAATGAACAAGGCAATGGATCAATGTATTGTCTCCCAAGAGAGGACATAGTGAACATGCAGTTGCCTCAAAGAAGTGATGCAGCTGATCTCTGA 1956 0.4284 MQVDVSRIFIQTLLGFHHPHGLMTIREKYHVEGYFLLMRIGGAGYQTYFVGKKFKLAKWRRFRLLFLWSKLSMDLFLILIPDLPSENFSPILILTPATNVQKGTRQENMAVTGSTSGQPQFIASTGNRSSSNAPLIENSETDQIVVPDRASWKNLFSYMGPGFLVSIAYIDPGNFETDLQAGAQYKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCRTEYPRSTNFILWVIAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVLTIAVCFFMELGYAKPDAEEVLEGLFVPKLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVHGIKEACRFYMVESAFALMVAFLINISVISVSGAVCNSLNLNPEDQASCEDLDLNKASFLLKNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLTPWIRNLLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSDTKMGAYVNSKTISAVTWIIGSLIMAINIYYLLTGFIKLLLHSHVEIVGKVFLGILGFSGIAMYLAGIAYLVFRKNREATHLLALTTPESRQMENEQGNGSMYCLPREDIVNMQLPQRSDAADL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1981 651 Hamap Divalent metal cation transporter MntH [mntH]. 147 563 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 Pfam Natural resistance-associated macrophage protein 175 538 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 PRINTS Natural resistance-associated macrophage protein signature 507 526 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 PRINTS Natural resistance-associated macrophage protein signature 337 360 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 PRINTS Natural resistance-associated macrophage protein signature 287 308 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 PRINTS Natural resistance-associated macrophage protein signature 262 281 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 PRINTS Natural resistance-associated macrophage protein signature 447 466 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 PRINTS Natural resistance-associated macrophage protein signature 234 260 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 PRINTS Natural resistance-associated macrophage protein signature 475 492 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 NCBIfam Nramp family divalent metal transporter 160 527 - -
Bisa10g1981 651 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 131 607 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa10g1981 651 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 154 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1981 Bisa-ChrBisa10 53150558 53160065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1981 109 651 Inorganic Solute Cotransporters AT1G80830 78.493 0.0 864