Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1979 ATGTCCATCCTCTCCGTCCCCATTGCGTCGTGCCACTGTCTCTTATCTCTCTCTTGTCTCAGCATCTTCCCCTCCACCTTAAAACGCACGCGACGTTACTCTCTCTCTCTCTATCTCTCTCTATCTCCCAAACGTACCAACCCAAACAGAAACGTTTCTTTTTTGCCCCAATTGCTGCGTCATACGTTTCGATTCTTTTTCTCTGAAAAAGAGCCGAAGATGCCTTCTGCTGACATTTCATCTGCTTCCGGCCAAACCGTCTGCGTCACCGGCGCCGGCGGCTTCATCGCCTCTTGGATTGTCAAGCTTCTGTTGGAGAGAGGCTACACTGTGAGAGGCACCGTCAGAAACCCAGATGATTCTAAGAATGCACACTTGAAGGAGCTGGAAGGAGCAAAGGAGAGGCTGACTCTGCATAAAGTTGATCTTCTTGATCTCAACTCTGTTAGAGCTGTTGTTAACGGTTGCGATGGCGTCATTCACACGGCCTCTCCGGTCACCGACAATCCAGAGGAGATGGTGGAACCAGCGGTGAACGGGACCAAGAATGTGATTATAGCAGGCGCAGAAGCAAAAGTCCGAAGAGTGGTGTTTACGTCATCAATTGGGGCAGTGTACATGGACCCCAGTAGGAGTATGGACGTGGTGGTTGATGAGTCTTCCTGGAGTGATCTCGAATACTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGGCAGTGGCAGAGCAGGCAGCATGGGACGAGGCAAAAGCGAGAGGGGTGGACTTGGTGGTGGTGAACCCGGTTCTGGTGCTTGGACCGTTGCTGCAACCCACCATCAATGCCAGCACAATTCACATCCTCAAGTATCTCACTGGCTCTGCTAAGACCTATGTCAACGCCACTCAGGCTTATGTGGATGTCAAAGATGTGGCATTAGCCCACATTCTTGTCTTTGAGACTCCTTCTGCTTCTGGTCGTTATTTATGTGCTGAGAGCTCACTCCACCGTGGAGAGCTCGTTGAAATTCTGGCTAAGTTGTTCCCAGAATACCCAGTTCCTACCAAATGTTCAGATGAGAAGAATCCAAGAGCAAAACCCTACATATTCTCTAACCAGAAGCTAAAGGATTTGGGACTGGAATTTACCCCAATAAAGCAGTGCCTATACGACACCGTTAAGAGCCTACAGGACAAAGGACACCTTTCTGTTCCTCCCAAGCAAGAAGAAGCTGCTCAGGTTAAATCCTAA 1233 0.4939 MSILSVPIASCHCLLSLSCLSIFPSTLKRTRRYSLSLYLSLSPKRTNPNRNVSFLPQLLRHTFRFFFSEKEPKMPSADISSASGQTVCVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDSKNAHLKELEGAKERLTLHKVDLLDLNSVRAVVNGCDGVIHTASPVTDNPEEMVEPAVNGTKNVIIAGAEAKVRRVVFTSSIGAVYMDPSRSMDVVVDESSWSDLEYCKNTKNWYCYGKAVAEQAAWDEAKARGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVDVKDVALAHILVFETPSASGRYLCAESSLHRGELVEILAKLFPEYPVPTKCSDEKNPRAKPYIFSNQKLKDLGLEFTPIKQCLYDTVKSLQDKGHLSVPPKQEEAAQVKS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1979 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 390 IPR036291 -
Bisa10g1979 410 Gene3D - 76 410 - -
Bisa10g1979 410 FunFam Cinnamoyl-CoA reductase 1 78 409 - -
Bisa10g1979 410 CDD FR_SDR_e 87 374 - -
Bisa10g1979 410 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 85 387 - -
Bisa10g1979 410 Pfam NAD dependent epimerase/dehydratase family 87 318 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1979 Bisa-ChrBisa10 53144892 53149249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1979 84 350 Monolignol Biosynthesis Gene Families AT1G80820 74.906 5.04e-143 406