Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1963 ATGGACCTTCATAGGTCAGAGACATGTCCTTCTGAGACACCCTCAATGGACAGCCAAACAGAGAAGAAGATCAGGACCATAGAGAGAGATGACTCAGACTCACCATCTCCTCCTCCTCGTCATCATCATCATCATCATCTTCTGCTAGATCTGACTCTCTCTGGTAAGGAATCAAACCCAGAACTCAACCTCATCGACTGTTTTGACTCCAACTCCAAGTCAACCTTAAACTCCTCAGATTCCTCGTCCTGTCACGAAGTGGAGCCTCGGGTTTTCTCATGCAACTACTGTCAGAGAAAGTTCTACAGCTCTCAGGCTCTCGGAGGGCACCAGAATGCACACAAGCGAGAGAGAACTCTGGCCAAAAGAGGACACAGAGCTTCAGTTTCAGTGGATTTTGCACAGAGGTACTCTTACGCTAGCATGGCGTCTCTGCCTCTGCATGGATCGTATAACAGAGCTCTTGGGATTCAAGCACATTCCATGATTCACAAGCCCTCTTATCATCAACCTTCCATTGTTGGTCTTCCTCGTTCTCATCAAAATGGATGGTGGAGGCAGCCTCTTGATTCGCAGCCTGCAATCGGGAAGCTTTCATCTGGGAAAATCCATGGTGGGGATGAAACTGAAGCATCATCTTTTTCTCCAAAGAGAAAAGGAATTGGAGGGTGCTGGTTGGGGAGTGTGACTCATGTAAAAACTAAACAAGAAGACTTGCAGCAGCTTGACTTGTCCCTCAAACTCTAA 747 0.4726 MDLHRSETCPSETPSMDSQTEKKIRTIERDDSDSPSPPPRHHHHHHLLLDLTLSGKESNPELNLIDCFDSNSKSTLNSSDSSSCHEVEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHRASVSVDFAQRYSYASMASLPLHGSYNRALGIQAHSMIHKPSYHQPSIVGLPRSHQNGWWRQPLDSQPAIGKLSSGKIHGGDETEASSFSPKRKGIGGCWLGSVTHVKTKQEDLQQLDLSLKL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1963 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Bisa10g1963 248 SUPERFAMILY beta-beta-alpha zinc fingers 89 119 IPR036236 -
Bisa10g1963 248 Gene3D Classic Zinc Finger 69 144 - -
Bisa10g1963 248 MobiDBLite consensus disorder prediction 195 215 - -
Bisa10g1963 248 MobiDBLite consensus disorder prediction 18 38 - -
Bisa10g1963 248 MobiDBLite consensus disorder prediction 1 44 - -
Bisa10g1963 248 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Bisa10g1963 248 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 248 IPR044246 GO:0009788
Bisa10g1963 248 FunFam Zinc finger protein 2 69 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1963 Bisa-ChrBisa10 52628715 52629461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1963 44 248 C2H2 Transcription Factor Family AT1G80730 45.045 2.31e-43 145