Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1927 ATGGAAGTTGCCGCTCTTTGCCACAATCAAGTACCAGATGGTGAATGCATTGAGGATCAGAAAGAAGATGGAGCATTAATTGAATTAGATTGTCAAAATGGGGTTTCTGAAGGAAGGAAGGAATTTGTTGCACCAGCTGTTGGGATGGAGTTTGAGTCCTATGATGATGCCTACAATTATTATATCTGCTATGCCAAGGAGGTGGGATTTCGTGTAAGGGTGAAAAATTCGTGGTTCAAGCGAAATAGCAGAGAAAAGTATGGTGCAGTGCTATGCTGTAGCAGCCAGGGTTTTAAAAGAATAAAAGATGTTAACCATTTGAGAAAGGAAACAAGAACTGGTTGTCCTGCAATGATAAGGATGAGGTTAGTGGATTCTCAGAGATGGAGGGTACTTGAGGTTACACTTGAACATAACCACCTTTTAGGTGCTAAAATTTATAGGTCAATGAAGAAGATGGGAGTTGGAGCCAAAAGGAAGTCACTGCCGAGTTCTGATGCTGAAGTGCGAACAATTAAGTTATATCGTGCACTTGTAATAGATGCGGGAGGTAATGTTTATGCAAACCCCAGTACCAGAGAATTCAGAACTTCTTTTGATTTTTCTAGTCAGTTGAACCTTAAAAAAGGTGACACACAGGCCATTTATAACTACCTTTGCCGTATGCAATTGACAAATCCAAATTTGTTTTACTTGATGGATTTCAATGATGAAGGACATTTGAGGAATGTATTCTGGGCTGATTCGAAGTCTAGGGCTGCATGTGGTTATTTTGGTGATGTTATTTATTTTGACAACACATATCTGTCAAACAAATATGAAACTCCTCTTGTGGCTTTTGTTGGCATTAATCACCATGGTCAATCAGTGTTATTGGGTTGTGGCTTACTTGCTGGTGAAACATTAGAATCTTATATGTGGTTGTTCAGAACATGGGTCACATGTATGTTAGGATGTTTTCCCCAAACTATTATTACCGATAGATGCAAAACTTTGCAGAGTGCAATTGCAGAAGTTTTCCCAAGATCTCGTCATTGTTTTGGCTTGTCACTAATCATGAAAAAAGTACCAGAGAAGTTGGGAGGGTTGCGCAATTATGATGCAATCAGGAAAGCACTGAACAAAGCAGTTTATGAGACATTGAAAGTGATTGAATTTGAAGCAGCATGGGGATTTATGATTCAGCGGTTTGGAGTTTGTGATCATGAGTGGCTTCGTTCTATCTATGAAGACCGAGTTCGTTGGGCACCAGTATACTTGAAGGACATTTTTTTTGCTGGAATGTCTGCAGCAAGTCCTGGTGAAACCTTGAGTCCTTTTTTTGATAGATATGTGCACAAACAGACTCCTTTGAAGGAGTTTCTTGATAAGTATGAATTAGCCCTCCAAAAGAAGCACAAAGAAGAATTTGCTGCCGATATTGACTCAAGAAGCTCGAGTCCCTTGCTGAAAACAAGATGTTCTTTTGAGCTGCAGCTCTCCAAATTGTACACGAGAGCAATATTTACAAAGTTCCAATATGAAGTGGAAGAAATGTATTCTTGTTTTGGTACCACACAGTTACACGTGGATGGCCCAATTGTAATTTTCTTGGTCAAGGATCGTGTTTTAAGCGATGGAAATAGAAGGGAGATCAGGGATTTCGAAGTATTGTATAACAGGACAGCCGGCGAAGTTCGCTGCATCTGTAGCTGCTTTAACTTTAATGGATATTTATGCAGGCATGCCCTGTGCGTGCTAAATTTTAATGGGGTGGAGGAGATACCTTCCAAATTCATTCTTTCGCGATGGAAAAAAGATTACAAGCGCTTGCATGTTCCCGATTACAAATCCGGTATCATCGATGAGACTGACCGAACTCAATGGTTTAATCAGTTATTTAGATGTGCCTTGCAAGTTGTGGAGGAAGGGACAATTTCGTTAGACCATTTTAATGTAGCTTTACATGCGTTTCAAGAGTCGTTGGGTAGGATCCATGACGTAGAACAGAGACAGGAGTAA 2001 0.4008 MEVAALCHNQVPDGECIEDQKEDGALIELDCQNGVSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLVDSQRWRVLEVTLEHNHLLGAKIYRSMKKMGVGAKRKSLPSSDAEVRTIKLYRALVIDAGGNVYANPSTREFRTSFDFSSQLNLKKGDTQAIYNYLCRMQLTNPNLFYLMDFNDEGHLRNVFWADSKSRAACGYFGDVIYFDNTYLSNKYETPLVAFVGINHHGQSVLLGCGLLAGETLESYMWLFRTWVTCMLGCFPQTIITDRCKTLQSAIAEVFPRSRHCFGLSLIMKKVPEKLGGLRNYDAIRKALNKAVYETLKVIEFEAAWGFMIQRFGVCDHEWLRSIYEDRVRWAPVYLKDIFFAGMSAASPGETLSPFFDRYVHKQTPLKEFLDKYELALQKKHKEEFAADIDSRSSSPLLKTRCSFELQLSKLYTRAIFTKFQYEVEEMYSCFGTTQLHVDGPIVIFLVKDRVLSDGNRREIRDFEVLYNRTAGEVRCICSCFNFNGYLCRHALCVLNFNGVEEIPSKFILSRWKKDYKRLHVPDYKSGIIDETDRTQWFNQLFRCALQVVEEGTISLDHFNVALHAFQESLGRIHDVEQRQE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1927 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 659 IPR031052 GO:0006355
Bisa10g1927 666 Pfam MULE transposase domain 261 355 IPR018289 -
Bisa10g1927 666 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Bisa10g1927 666 Pfam SWIM zinc finger 558 580 IPR007527 GO:0008270
Bisa10g1927 666 SMART 26again6 559 586 IPR006564 GO:0008270
Bisa10g1927 666 Pfam FAR1 DNA-binding domain 59 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1927 Bisa-ChrBisa10 51974382 51976382 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa10g1927 MULE 4.6e-27 CL0219