Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1924 ATGGCCACTGTATCCCTCTCTTATCAACCCTATCTGCATCCACCCTCCACTTCCTCCTCCTCTTCTTCTTTTTACTTCTGTGGTGCTGTCCATCTCCGGACCCATAAGAACTTCGCTTCTATCCGTTTACCTTCGCTTTTTTCTTCTTCGACATTCAATACAAAGGACTCAGCAAGGCGCTTTAGAACAGCAATTTCTGCTTCTGGCGACTATTATTCTACTCTTGGAGTCCCCAAATCTGCGACTGGCAAGGAGATTAAAGCGGCTTATCGAAGGTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTACTGAAAAGTTCAAAGAAATTAGTGCTGCATACGAGGTGCTCTCAGATGATAAAAAGAGGGCTTTGTATGATCAATATGGAGAGGCTGGAGTTAAGAGTACAGTGGGAGGAGCTTCAAATGCATATACGACTAATCCATTTGATTTGTTTGAGACATTTTTTGGGTCAAGTATGGGTGGCTTCCCTGGCATGGATCCAACTGGATTTGGTACACGGCGTCGCACTACTGTTATTAAGGGTGAAGACATCCGTTATGATATTTCCTTGGAATTTTCTGAGGTAATTTTTGGAGCAGAGAAAGAATTTGAGCTGTCCCATCTGGAAAAATGTGAGGCCTGTAATGGGACCGGAGCCAAGATAGGCTCCAAGATGAGAATATGTTCAACTTGTGGTGGGAGGGGCCAGGTGATGAGGACTGAGCAAACACCTTTTGGATTGTTCTCTCAGGTTTCAGTATGTCCTAAATGTGGAGGGAATGGTGAAGTCATATCTGAATATTGCCGGAAATGCAGTACTGAAGGACGTATTCGGGTTAAGAAAACTATTAAAGTCAAAGTTCCTCCTGGGGTTAGTTCCGGCAGTATTCTGAGAGTTGTTTCAGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGACCTATATGTATATCTTCAAGTGGAAGAGATACCGGGAATTCAAAGAGATGGCATTAATCTCCGCTCAACAATATCAATAAGTTATCTGGATGCCATACTAGGGGCTGTTGTTAAGGTAAACACAGTTGAAGGCAGTTCTGAACTACAGGTACCCCCTGGTACCCAACCTGGGGATGTCCTTGTCCTTGAGAGGAAAGGTGCACCAAAATTAAACAAACCATCGATTCGTGGTGATCACTTATTTACAGTTAAAGTTACTATACCAAAACGTATCAGTGCAAAGGAGCGTGAGTTGCTTGAAGAACTTTCTTCGCTAGTCAAGACAACGAGCAGCCGTTCGAAACCTCGCCCTCGAACTCATTCTTCTACAGGAAGCACCGAAGGTCCCACAGCTAGAACTGCTGAAAGTCCAACAACAGTAGAAGAAAAAACAGAACAATCAGAAGACAAAGATGACATTTGGAAAAAGTTAAAGGATTTTGCTGGGTCCGTGGCAAATGGAGCTTTGAAGTGGCTAAAAGATAACGTGTAG 1491 0.4427 MATVSLSYQPYLHPPSTSSSSSSFYFCGAVHLRTHKNFASIRLPSLFSSSTFNTKDSARRFRTAISASGDYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGASNAYTTNPFDLFETFFGSSMGGFPGMDPTGFGTRRRTTVIKGEDIRYDISLEFSEVIFGAEKEFELSHLEKCEACNGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPKCGGNGEVISEYCRKCSTEGRIRVKKTIKVKVPPGVSSGSILRVVSEGDAGPRGGPPGDLYVYLQVEEIPGIQRDGINLRSTISISYLDAILGAVVKVNTVEGSSELQVPPGTQPGDVLVLERKGAPKLNKPSIRGDHLFTVKVTIPKRISAKERELLEELSSLVKTTSSRSKPRPRTHSSTGSTEGPTARTAESPTTVEEKTEQSEDKDDIWKKLKDFAGSVANGALKWLKDNV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1924 496 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Bisa10g1924 496 PRINTS DnaJ domain signature 106 126 IPR001623 -
Bisa10g1924 496 PRINTS DnaJ domain signature 126 145 IPR001623 -
Bisa10g1924 496 PRINTS DnaJ domain signature 90 105 IPR001623 -
Bisa10g1924 496 PRINTS DnaJ domain signature 72 90 IPR001623 -
Bisa10g1924 496 FunFam Putative Mitochondrial DnaJ chaperone 274 323 - -
Bisa10g1924 496 SMART dnaj_3 69 126 IPR001623 -
Bisa10g1924 496 MobiDBLite consensus disorder prediction 425 472 - -
Bisa10g1924 496 MobiDBLite consensus disorder prediction 425 457 - -
Bisa10g1924 496 SUPERFAMILY Chaperone J-domain 67 176 IPR036869 -
Bisa10g1924 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 419 IPR008971 GO:0006457|GO:0051082
Bisa10g1924 496 Gene3D - 217 281 - -
Bisa10g1924 496 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 34 433 - -
Bisa10g1924 496 NCBIfam molecular chaperone DnaJ 70 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa10g1924 496 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Bisa10g1924 496 FunFam Molecular chaperone Hsp40/DnaJ family protein 333 425 - -
Bisa10g1924 496 Pfam DnaJ domain 70 131 IPR001623 -
Bisa10g1924 496 Hamap Chaperone protein DnaJ [dnaJ]. 67 480 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa10g1924 496 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 204 283 IPR036410 -
Bisa10g1924 496 CDD DnaJ 70 123 IPR001623 -
Bisa10g1924 496 CDD DnaJ_C 188 411 - -
Bisa10g1924 496 Gene3D - 333 425 - -
Bisa10g1924 496 FunFam Chaperone protein dnaJ A6 chloroplastic 217 281 - -
Bisa10g1924 496 ProSiteProfiles Zinc finger CR-type profile. 204 286 IPR001305 GO:0031072|GO:0051082
Bisa10g1924 496 FunFam Chaperone protein dnaJ A6 chloroplastic 67 173 - -
Bisa10g1924 496 Pfam DnaJ C terminal domain 190 408 IPR002939 -
Bisa10g1924 496 Gene3D - 187 323 - -
Bisa10g1924 496 CDD DnaJ_zf 217 281 IPR001305 GO:0031072|GO:0051082
Bisa10g1924 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 337 IPR008971 GO:0006457|GO:0051082
Bisa10g1924 496 Gene3D DnaJ domain 67 170 IPR036869 -
Bisa10g1924 496 MobiDBLite consensus disorder prediction 458 472 - -
Bisa10g1924 496 Pfam DnaJ central domain 217 281 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1924 Bisa-ChrBisa10 51933975 51941039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1924 71 133 C2H2 Transcription Factor Family AT1G74250 47.826 1.75e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1924 10 51933975 51941039 Bisa10g1924 10 51933975 51941039 ECH