Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1920 ATGCTTGCAGGGTGGAGGAACATTAGTAGAATCGGATTTGGTTTGGCGGGTCGATTTCAAGTTTGGAATTTTATCTACTTTCTGGGGTTGACTGAGAGGGAAGAGGGTTCGGAGGAGTTATATAGAGAGAAACACGAGAAGGTGGGACTGATTGGTCAGAAGGGTATGGCTTTCTTCTCAATCTTTTGTTGCGGAAAGGGTTCGGATCGGAAAGCAAGAGGGAAGACACAACCTACATGGCGGGTGTTTTCTTTAAAGGAACTGCACTCAGCTACAAATAATTTCAACTATGATAATAAGCTTGGAGAAGGGGGATTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGCTTGGAGCAACAAAGCAGATATGGAATTTGCCGTTGAAGTTGAGATATTGGCAAGAGTGCGACACAAGAATCTTCTCAGTCTACGTGGCTATTGTGCCGAAGGGCAGGAACGGCTAATTGTATATGACTATATGCCAAATCTGAGCCTACTCTCTCATCTCCATGGACAGCACTCTGCAGAATGCCTTCTTAATTGGAGCCGACGGATGAATATTGCAATGGGGTCTGCAGAAGGAATCGCATATCTCCACCACCAGGCAACTCCACACATCATCCACAGAGATGTTAAAGCAAGCAATGTGTTGTTGGATGCAGATTTCCAGGTTCAGGTTGCTGATTTCGGTTTTGCTAAGTTGATCCCTGATGGGGCCACACATGTGACTACGAGAGTGAAGGGTACTCTTGGCTACCTTGCGCCGGAGTATGCTATGTTAGGAAAAGCTTCTGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTAGAACTTGCAAGTGGCAAAAAACCGATTGAAAAAGTGAGTGGAACGATTAAGCGGTCGATAACCGATTGGGCACTACCGTTGGCTTGTGAAAAGAAGTTTAGTGAAATTGCAGATCCAAGACTAAATGGAGAGTATGTGGAGGAAGAGTTGAAAAGGGTTGTTTACGTTGCACTTGTTTGCGCTCAGAGTCAGCCTGAGAAGAGACCCACCATGCTTGAAGTGGTAGAGCTACTGAAAGGAGAATCTAAAGATAAGTGTTCTCAGTTAGAGAATCACGAACTGTTTAGTAACCCTCAATCTGCAAGTGACATGACATCAGCTGTAGAAGATAATTCTGACTTCATATCAGAAGAGAATTCGTCAAAACCTGAGTTGAAGGAGGATCCTGGGCCATGA 1260 0.4452 MLAGWRNISRIGFGLAGRFQVWNFIYFLGLTEREEGSEELYREKHEKVGLIGQKGMAFFSIFCCGKGSDRKARGKTQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLNWSRRMNIAMGSAEGIAYLHHQATPHIIHRDVKASNVLLDADFQVQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVSGTIKRSITDWALPLACEKKFSEIADPRLNGEYVEEELKRVVYVALVCAQSQPEKRPTMLEVVELLKGESKDKCSQLENHELFSNPQSASDMTSAVEDNSDFISEENSSKPELKEDPGP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1920 419 FunFam PTI1-like tyrosine-protein kinase At3g15890 171 382 - -
Bisa10g1920 419 PANTHER OS01G0253100 PROTEIN 67 372 - -
Bisa10g1920 419 Gene3D Phosphorylase Kinase; domain 1 66 170 - -
Bisa10g1920 419 MobiDBLite consensus disorder prediction 403 419 - -
Bisa10g1920 419 Gene3D Transferase(Phosphotransferase) domain 1 171 383 - -
Bisa10g1920 419 SUPERFAMILY Protein kinase-like (PK-like) 77 366 IPR011009 -
Bisa10g1920 419 SMART serkin_6 95 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1920 419 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Bisa10g1920 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Bisa10g1920 419 MobiDBLite consensus disorder prediction 379 402 - -
Bisa10g1920 419 ProSiteProfiles Protein kinase domain profile. 95 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1920 419 MobiDBLite consensus disorder prediction 378 419 - -
Bisa10g1920 419 Pfam Protein tyrosine and serine/threonine kinase 97 366 IPR001245 GO:0004672|GO:0006468
Bisa10g1920 419 FunFam PTI1-like tyrosine-protein kinase At3g15890 67 170 - -
Bisa10g1920 419 CDD STKc_IRAK 101 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1920 Bisa-ChrBisa10 51883387 51889593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1920 83 369 Trihelix Transcription Factor Family AT1G70460 50.172 2.91e-93 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Bisa10g1920 Pkinase 1.9e-44 CL0016