Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1899 ATGGCACAAATTTTGCTACACGGGACTCTCCATGTCACAATATACGAGGCGGATAGGCTGAAGAAACATAGTGGCAATATCTTTAGAAAGCTTAAGGAAAAATTTAAGGAGCCAGTTGGTTTTGGAAAAGGAGTTACCAAACTCTATGCAACCATTGATCTTGAGAAGGCAAGAGTTGGAAGGACTAGAATTCTAGAAAATGAACATTCCAACCCCAAGTGGTATGAGTCTTTTCACATTTATTGTGCTCATATGGCTTCTAATGTTGTGTTCACTGTGAAAGAGAATAACACTGTTGGGGCAACTTTAATTGGAAAAGCATATGTTCCTGTTGAGGAGATCTTGGATGGTGAAGTAATAAAAAGAAAGGTTGAAATCTTAGATGAGCACAAGAATCCTATTCACGGGGATCCAAGGATCCATGTGAAGCTGCAATTTTTTGATGTCACAAAAGAACTCAACTGGGCTCGTGGTATTAGAAGTCCTAAATTTCCTGGAGTTCCCCACACTTTCTACTCACAAAGACAAGGTTGTAAGATCTTTCTTTACCAGGATGCTCATGTCCCAGATAAATTTGTCCCGAATATTCCTCTTGCTGGTGGTCAGAAATATGAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACTAATGCCAAGCACTTAATATACATTACTGCCTGGTCTTTTAGTCCTGAAATTACCTTGGTAAGGGATTCTAGGAGACCTAGGCCTGGGGGAGGCATAACACTTGGTGAGCTTCTCAAGAAAAAGGCTAGTGAAGGCGTGAGAGTATTAATGCTTGTTTGGGATGATCGAACATCAGATGGTTTTTTTATAAAAGAAGGATTGATGACTACTCATGATAAAAAAACCCAGAATTACTTCAAGAACACCGATGTGCATTGTGTTTTATGCCCCCGCAATCCTGATGATGGTGAAAGCATTGTTAAGGGTTTCCAAATTAAAACCATGTTCACCCATCACCAGAAGACTGTGATTGTGGACAGTGAGTTGCCATGTGGAGGGTCGGATAAGCGAAGAATTGTTGGTTTCATTGGTGGTTTTGATCTTTGTGACGGAAGATATGATACTCCCTTCCATTCACTATTTAGAACCCTGGATACAGCACACCATAATGACTTTTTTCAACCCTGCTGTCATGGTACTACAATCAATAAAGGTGGTCCCAGGAAACCTTGGCATGAGATCCATTGCCGGCTTGAAGGACTCATTGCTTGGGACATTTTGTTTAACTTTGAGCAGAGATGGAGGGAGCAAGGTGGGAAGGATTTACTTGTTAAGCTGGGAGAGCTTCAAGATGTCATTATTCCTCCATCCCCAGTTATGTTTCCTAATGATCATGATACATGGAATGTTCAGTTATTTAGATCAATTGATGGTGGGGCTGCTTTTGGGTTCCCTGAGGTTCCTGAAGATGCTGCCAAGGCTGGTCTTGTTAGTGGGAAGGATAATATCATTGATCGTAGTATACAAGATGCTTATATTAATGCCATTCGACGAGCAAAGAATTTCATATATATTGAAAATCAATACTTTATTGGGAGCTCTTTTGCTTGGAGTGTTGATGATATCAAGCCTGAAGACATTAATGCTTTGCATCTAATCCCAAAGGAGCTTTCACTTAAAATTGTTAGCAAGATTGAAGCTGGGGAAATGTTTACTGTGTATGTTGTGATCCCAATGTGGCCAGGGGCTATCCCAGAAAGTCCATCAGTGCAGTCAATGTTGGACTGGCAGAGGAGGACAATGGAGATGATGTACAAAGATGTTATTCAGGCACTCAAGGCCAGGGGACTTGAGGAAGATCCTCGCAACTATTTGACATTCTTCTGCCTTGGTAATCGGGAGTTGAAGAAACATGGAGAATATGAGCCTTCAGAAATACCAGATCCTGATACGGATTATATGAGAGCCCAGGAGGCTCGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATTGTTGATGACGAATACATAATCATAGGATCTGCTAACATCAACCAGAGATCAATGGATGGTGCCAGGGACTCCGAGATTGCCATGGGTGCTTATCAACCTTATCATTTGGCTCACAGGCAGCCTGCACGTGGTCAGATCCATGGTTTCCGCATGTCACTGTGGTATGAGCACCTTGGCATGCTTGATGAATCCTTCCTCCATCCTGAAAGTGAAGAATGTGTTAGGAGGGTGAACCAGATTGCTGACAAGTACTGGGATCTCTATTCAAGCAAGTCACTTGAACACGACCTTCCCGGACACTTGCTTCCCTATCCCATTGGTATTACCAGTGAAGGAGAAATCATAGGGCTGCCAGGATTTGAATACTTCCCCGACACAAAGGCTCGTGTTCTTGGGGGCCAAGCAAACTTCATGCCACCAATCCTTACAACTTAA 2424 0.4241 MAQILLHGTLHVTIYEADRLKKHSGNIFRKLKEKFKEPVGFGKGVTKLYATIDLEKARVGRTRILENEHSNPKWYESFHIYCAHMASNVVFTVKENNTVGATLIGKAYVPVEEILDGEVIKRKVEILDEHKNPIHGDPRIHVKLQFFDVTKELNWARGIRSPKFPGVPHTFYSQRQGCKIFLYQDAHVPDKFVPNIPLAGGQKYEPHRCWEDVFDAITNAKHLIYITAWSFSPEITLVRDSRRPRPGGGITLGELLKKKASEGVRVLMLVWDDRTSDGFFIKEGLMTTHDKKTQNYFKNTDVHCVLCPRNPDDGESIVKGFQIKTMFTHHQKTVIVDSELPCGGSDKRRIVGFIGGFDLCDGRYDTPFHSLFRTLDTAHHNDFFQPCCHGTTINKGGPRKPWHEIHCRLEGLIAWDILFNFEQRWREQGGKDLLVKLGELQDVIIPPSPVMFPNDHDTWNVQLFRSIDGGAAFGFPEVPEDAAKAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFIGSSFAWSVDDIKPEDINALHLIPKELSLKIVSKIEAGEMFTVYVVIPMWPGAIPESPSVQSMLDWQRRTMEMMYKDVIQALKARGLEEDPRNYLTFFCLGNRELKKHGEYEPSEIPDPDTDYMRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLAHRQPARGQIHGFRMSLWYEHLGMLDESFLHPESEECVRRVNQIADKYWDLYSSKSLEHDLPGHLLPYPIGITSEGEIIGLPGFEYFPDTKARVLGGQANFMPPILTT 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1899 807 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Bisa10g1899 807 Pfam Phospholipase D Active site motif 654 680 IPR001736 GO:0003824
Bisa10g1899 807 SMART pld_4 653 680 IPR001736 GO:0003824
Bisa10g1899 807 SMART pld_4 325 363 IPR001736 GO:0003824
Bisa10g1899 807 FunFam Phospholipase D delta 200 443 - -
Bisa10g1899 807 Gene3D Endonuclease Chain A 199 439 - -
Bisa10g1899 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Bisa10g1899 807 SMART C2_3c 9 123 IPR000008 -
Bisa10g1899 807 SUPERFAMILY Phospholipase D/nuclease 450 737 - -
Bisa10g1899 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Bisa10g1899 807 Pfam Phospholipase D C terminal 725 796 IPR024632 -
Bisa10g1899 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Bisa10g1899 807 CDD C2_plant_PLD 2 147 - -
Bisa10g1899 807 PANTHER PHOSPHOLIPASE D 4 795 IPR015679 -
Bisa10g1899 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Bisa10g1899 807 Gene3D C2 domain 6 156 IPR035892 -
Bisa10g1899 807 Gene3D Endonuclease Chain A 476 697 - -
Bisa10g1899 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bisa10g1899 807 Pfam C2 domain 8 124 IPR000008 -
Bisa10g1899 807 FunFam Phospholipase D 466 699 - -
Bisa10g1899 807 SUPERFAMILY Phospholipase D/nuclease 150 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1899 Bisa-ChrBisa10 51540704 51544649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1899 1 807 Phospholipase D Gene Family (Wang group) AT3G15730 74.754 0.0 1305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1899 10 51540704 51544649 Bisa06g2042 06 63932359 63936553 CCT
Bisa06g2042 06 63932359 63936553 Bisa10g1899 10 51540704 51544649 ECH
Bisa09g1196 09 17202641 17206654 Bisa10g1899 10 51540704 51544649 ECH
Bisa10g1899 10 51540704 51544649 Bisa10g1899 10 51540704 51544649 ECH