Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1887 ATGGCTCACGATTTCTCCGGACAAGAAGAGAAGCACACACCTTCCTATGGCTTAGCTGCTAGAGACTCCTCAGGAATTGTCTTCCCCTTCCACTTCTCCAGAAGGGCAAACGGTGATCATGATATCACCATGAAAATACTGTATTGTGGGATTTGCCACGGTGACGTTCATCTTCTGAGGAATGAATTAGGTCATAGCATCTATCCCATGGTTGCCGGGCACGAGATTGTGGGAGAAGTGATAAAGGTGGGTCCTAGTGTCACAAAATTCAAAATTGGGGATATAGCTGGGGTGGGTCCAATTTGGGGTTCGTGTGGCTCCTGCTCTCTTTGCAATCAAGACAGTGAAAACTATTGCCCCAACTGCATTTTAACATATAATTCCCATGACCACGACGGATCAATAACTTATGGTGGATACTCCAATAAAACTGTGGTTGACCAGCATTTTGCAGTCAAAATGCCCAATGGCTTGCCACATGATGGTGCAGCGCCCTTACTGTGTGCTGGACTCACAGTATACAGCCCCATGAAGTACCATGGACTGTGTGAGCCAGGTCAGCATTTGGGTGTGGTTGGCTTAGGTGGACTAGGCCACGTGGCTGTCAAGTTTGCTAAGGCTATGAACATAAAGGTGACGGTTATAAGTACTTCTCCTAATAAGAAGAAAGAGGCTATGGAAAAGCTCGGCGCGGACGTTTTTATTCTCAACAATGACCAACAACACTTGCAGGATGGGAAAGGCACGTTGGATGGTATCATTGACACAGTATCTGGACCTCACTCTCTGCACCCATTAATTGATTTATTGAAGATGGGAGGAAAATTGGTTTTGGTTGGAGCATCGATCACAGATCCTGTGTTACCGACTTTCTCTTTGATGATGGGAAGGAAGATGATTACTGGAAGTGTAGGGGGAGGAATGAAAGATAGCCAAGAAATGATTGATTTTGCAGCAAAGCACAATATCACAGCAGATATTGAGGTTATTCCCATGGATTACGTGAACACTGCCTTGGAACGTGTTGCAAAAAATGATGTTAAATATCGATTTGTCATCGATGTGGCCAACACGATTAATAAGGACGACACTGCTAATTAG 1101 0.4478 MAHDFSGQEEKHTPSYGLAARDSSGIVFPFHFSRRANGDHDITMKILYCGICHGDVHLLRNELGHSIYPMVAGHEIVGEVIKVGPSVTKFKIGDIAGVGPIWGSCGSCSLCNQDSENYCPNCILTYNSHDHDGSITYGGYSNKTVVDQHFAVKMPNGLPHDGAAPLLCAGLTVYSPMKYHGLCEPGQHLGVVGLGGLGHVAVKFAKAMNIKVTVISTSPNKKKEAMEKLGADVFILNNDQQHLQDGKGTLDGIIDTVSGPHSLHPLIDLLKMGGKLVLVGASITDPVLPTFSLMMGRKMITGSVGGGMKDSQEMIDFAAKHNITADIEVIPMDYVNTALERVAKNDVKYRFVIDVANTINKDDTAN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1887 366 Gene3D - 19 355 - -
Bisa10g1887 366 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Bisa10g1887 366 SMART PKS_ER_names_mod 21 353 IPR020843 GO:0016491
Bisa10g1887 366 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Bisa10g1887 366 CDD CAD1 17 354 IPR047109 GO:0016616
Bisa10g1887 366 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Bisa10g1887 366 Pfam Alcohol dehydrogenase GroES-like domain 40 154 IPR013154 -
Bisa10g1887 366 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Bisa10g1887 366 PANTHER ALDEHYDE REDUCTASE 10 358 IPR047109 GO:0016616
Bisa10g1887 366 SUPERFAMILY GroES-like 25 187 IPR011032 -
Bisa10g1887 366 Gene3D - 169 325 - -
Bisa10g1887 366 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1887 Bisa-ChrBisa10 51379585 51381157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1887 12 366 Monolignol Biosynthesis Gene Families AT2G21730 56.022 4.46e-139 399