Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1854 ATGGCTGAACAGAGCGTTTTATTTCCCTTTCATTTCATTTCCAATTTTCCCGCATCTGGATTCATTGTCTATATTTTGCTGAATCTTGTAGAGATGAAGAAAGAAAACACTGGCCCTCTGAAAGCTGGAGAGCTCCCGGGTCGTTTGACTCGTGCTCGAGCTGCTGCCTTTCGTGCTTCTGGACAGCTTCCTCCACTGAAGGAGCCAGCACAACAAAATCAGAAGCAATTACGAGCTAATCCGAAAAGATTGGCTTCTGATAAAACATGTTTTCCACGTAAAAAGAGGGCTGTTCTCCAGGATGTCACTAATGCCACCATGGTTTTCTGTGAAAATTCATATAGGAACTGTATCCATGCTGCTAAAATTCAGGCTAGGAAAAGCAAGTTTGCTAAGGGTGGTCAAGTTAATAGTTCCAAACTGGTTCCTTCAATTACTGTGGTGTTACCACGGCTTCAGGTTGACTCAAAATCAAAGAGTTTACTTGAAATGGAAAACGTGTTAGAAGATGCTACCTGTTCAAGTAATTTGAAAGACGATTCGCTTCATCGGCCGAGTGCTAGCAATGCGTGTGGGTTACATGATAATTTGCTCGGAGGTCAGACACCCGGATTATCTCCTCAGCCTCTAATTTCTCACAGAAAAGCCAAGAAAGGTAGCCTTTCTGAACTTCTTAGTGCATCAACTAATCCAGACATCACTGATATAGACGCTGATCATGAAGATCCTCAACTATGCAGTGTCTATGTAGTTGATATCTATGATAACCTACGTGTTTCTGAGCTTTTAAGAAGACCTTGCCCTAACTTCATGGAAACAGTACAGCGAGATATAACTCAAAGCATGCGTGGGATACTGGTTGATTGGCTCGTAGAGGTTTCTGAGGAATACAAATTGGTTCCAGACACTCTTTACCTCACTGTATATCTCATAGATTGGTTTCTTTCCAAAAGTTACATGGAACGGCAAAGACTTCAGTTGCTTGGCATCACCTGCATGCTGATTGCCTCGAAGTACGAAGAAATTTGTCCCCCCCGAATTGAAGAATTCTGCTCCATCACAGACGACACATACACAAAAGAGGAGGTTCTTAAAATGGAGACTCAAGTGTTGAAGTGCTCTCAGTTTCAACTGTCTGCTCCCACAACAAAAACTTTCCTCAGGAGGTTCCTTCGAGCAGCGCAAGCTTCTTACAAGAGCCCTAGCCTTGAATTGGAGTATCTGGCCAATTATCTTACTGAGCTAACCTTGATTGATTATGGTTTCTTGACCTACCTTCCTTCTATCATTGCTGCATCAGCTGTGTTTCTTGCCAGGTGGACATTAGATCAGTCATACCACCCATGGAATCCAACTCTTGAACACTATTCAAGATACAATGCATCAGATTTGAAAACCACAGTTCTTGCACTACAAGATCTGCAACTGAACACCAATGGCTGCCCTTTGAGTGCCATTCGCATGAAGTACAGGCAAGACAAGTTTAAATGTGTGGCGGCCATGTCTTCACCGAAACTGCTGGAAACTCTGTTCTGA 1536 0.4303 MAEQSVLFPFHFISNFPASGFIVYILLNLVEMKKENTGPLKAGELPGRLTRARAAAFRASGQLPPLKEPAQQNQKQLRANPKRLASDKTCFPRKKRAVLQDVTNATMVFCENSYRNCIHAAKIQARKSKFAKGGQVNSSKLVPSITVVLPRLQVDSKSKSLLEMENVLEDATCSSNLKDDSLHRPSASNACGLHDNLLGGQTPGLSPQPLISHRKAKKGSLSELLSASTNPDITDIDADHEDPQLCSVYVVDIYDNLRVSELLRRPCPNFMETVQRDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKSYMERQRLQLLGITCMLIASKYEEICPPRIEEFCSITDDTYTKEEVLKMETQVLKCSQFQLSAPTTKTFLRRFLRAAQASYKSPSLELEYLANYLTELTLIDYGFLTYLPSIIAASAVFLARWTLDQSYHPWNPTLEHYSRYNASDLKTTVLALQDLQLNTNGCPLSAIRMKYRQDKFKCVAAMSSPKLLETLF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1854 511 PANTHER CYCLINS 207 492 IPR039361 -
Bisa10g1854 511 SMART Cyclin_C_2 381 504 IPR004367 -
Bisa10g1854 511 CDD CYCLIN_AtCycA-like_rpt2 381 495 - -
Bisa10g1854 511 PIRSF Cyclin_A_B_D_E 50 510 IPR046965 GO:0016538|GO:0044772
Bisa10g1854 511 FunFam Mitotic cyclin 6 266 366 - -
Bisa10g1854 511 MobiDBLite consensus disorder prediction 66 80 - -
Bisa10g1854 511 Gene3D - 266 379 - -
Bisa10g1854 511 MobiDBLite consensus disorder prediction 62 85 - -
Bisa10g1854 511 SUPERFAMILY Cyclin-like 241 378 IPR036915 -
Bisa10g1854 511 FunFam Cyclin A1 368 500 - -
Bisa10g1854 511 SMART cyclin_7 288 372 IPR013763 -
Bisa10g1854 511 SMART cyclin_7 385 473 IPR013763 -
Bisa10g1854 511 CDD CYCLIN_AtCycA_like_rpt1 242 377 - -
Bisa10g1854 511 SUPERFAMILY Cyclin-like 381 506 IPR036915 -
Bisa10g1854 511 Pfam Cyclin, C-terminal domain 381 503 IPR004367 -
Bisa10g1854 511 Gene3D - 252 500 - -
Bisa10g1854 511 Pfam Cyclin, N-terminal domain 252 378 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1854 Bisa-ChrBisa10 50619183 50625124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1854 32 511 Core Cell Cycle Gene Families AT1G80370 55.350 6.79e-169 483