Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1852 ATGTCACCGGAGAATCAACAAACCGACGTCGTTGAGCTCAACCTCAACGAGACCGAGCTCACCTTGGGCCTCCCGGGAGCCAAAACGGCCCAGAAACGTGGCTTCTCGGAGACCGTTGATCTCCATCTCGGTACAACCCAAGGCGCATCGGAGAAATCAGATAGCAATAAATCTCCGGCAGCAAAGGCGCAGATGGTGGGGTGGCCGCCGGTGCGGGCGAACCGGAAGAGCGCGATGAAGAAGTGCAAGTACGTGAAGGTGGCGGTGGACGGAGCTCCATATCTGAGGAAGGTGGACCTTGAAGTGTATGGGAGTTATGAGGAGCTTATGAAAGCTTTAGAGACCATGTTTTCCTGCTTAACCATCCGCAATGATTTGAATGAGAGGAAGCATATTATAATGGAAAATGGAAGTGGAAATAATGGAGTTGAATACTTACCCACCTATGAGGACAGAGATGGTGACTGGATGATGGTTGGAGACGTACCATGGAAGATGTTTGTTGAATCATGCAAGAGAATAAGGTTGATGATGAGCTCAGAAGCCATTGGCTTAACTTCAAAGTGA 567 0.4956 MSPENQQTDVVELNLNETELTLGLPGAKTAQKRGFSETVDLHLGTTQGASEKSDSNKSPAAKAQMVGWPPVRANRKSAMKKCKYVKVAVDGAPYLRKVDLEVYGSYEELMKALETMFSCLTIRNDLNERKHIIMENGSGNNGVEYLPTYEDRDGDWMMVGDVPWKMFVESCKRIRLMMSSEAIGLTSK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1852 188 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 184 IPR003311 GO:0005634|GO:0006355
Bisa10g1852 188 MobiDBLite consensus disorder prediction 46 69 - -
Bisa10g1852 188 Pfam AUX/IAA family 21 187 IPR033389 -
Bisa10g1852 188 FunFam Auxin-responsive protein 77 188 - -
Bisa10g1852 188 Gene3D - 76 188 - -
Bisa10g1852 188 SUPERFAMILY CAD & PB1 domains 76 177 - -
Bisa10g1852 188 MobiDBLite consensus disorder prediction 46 60 - -
Bisa10g1852 188 ProSiteProfiles PB1 domain profile. 82 179 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1852 Bisa-ChrBisa10 50598569 50601604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1852 21 186 B3 DNA Binding Superfamily AT4G23980 27.811 2.20e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa10g1852 AUX_IAA 3.5e-46 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1852 10 50598569 50601604 Bisa10g1852 10 50598569 50601604 ECH