Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1851 ATGGAGAGGGAAGGTTTTGGGTTGGAGATAACGGAGCTGAGGTTGGGGCTGCCGGGGAGGGAGGATCAACGTAGGAGGAATGAGAAGAAGAGGGGGTTCTGGGAGATTGACGATAAGGAGGACGGTGCCGATGATCATCAGAACAGCTGCTCCGGTGACCTGAAGGTGAAGCCTCCGGCGGGGAAGAACGAGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGAAGAAGGTGAGTGAAGTGGTGGTGTCGAAAATGTACGTGAAGGTTAGCATGGATGGGGCTCCTTTCTTGCGTAAGATTGATCTGTCCATGGAAAAGGGTTACTCAGAATTAGGTTCGGCCTTAGAGAAGCTCTTTGGCTGCCATGGAATCAGAGAGGCGTTGAAGGATGGAGACAACTGTGAGCAAGTTCCCATTTATGAGGACAAAGATGGAGACTGGATGCTAGTTGGAGATGTCCCTTGGGAGATGTTTATTGAATCATGCAAGAGATTGAGGATAATGAAGAAATCAGATGCAAAGGGATTTGGTCTGCAACCAAAAGGGCCTTTAAAGGGATTTATAGAAGGCGTGACCAAGTGA 585 0.506 MEREGFGLEITELRLGLPGREDQRRRNEKKRGFWEIDDKEDGADDHQNSCSGDLKVKPPAGKNEVVGWPPVCSYRKKVSEVVVSKMYVKVSMDGAPFLRKIDLSMEKGYSELGSALEKLFGCHGIREALKDGDNCEQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKKSDAKGFGLQPKGPLKGFIEGVTK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1851 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 175 IPR003311 GO:0005634|GO:0006355
Bisa10g1851 194 Gene3D - 80 181 - -
Bisa10g1851 194 Pfam AUX/IAA family 28 177 IPR033389 -
Bisa10g1851 194 FunFam Auxin-responsive protein 80 181 - -
Bisa10g1851 194 MobiDBLite consensus disorder prediction 17 51 - -
Bisa10g1851 194 ProSiteProfiles PB1 domain profile. 85 173 IPR000270 GO:0005515
Bisa10g1851 194 MobiDBLite consensus disorder prediction 17 56 - -
Bisa10g1851 194 SUPERFAMILY CAD & PB1 domains 82 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1851 Bisa-ChrBisa10 50555554 50560962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1851 6 175 B3 DNA Binding Superfamily AT4G23980 30.588 4.37e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa10g1851 AUX_IAA 1e-44 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1851 10 50555554 50560962 Bisa10g1851 10 50555554 50560962 ECH