Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1817 ATGCGTTTATCGTCTGCTTCATCAGTAGTGCTCGAGTGTGTGCATTGCATTGTTTGGTCAGCTGGGGGTTGGAGGGGATACTCTTTGCTGGGAGACCAAATTCTAAGCAATCGGTATATTTTTTTTCCTGCAAATATGAGCGTGGTTGGTTTTGATGTTGGGAATGAGAGCTGCATTGTTGCTGTAGCAAGGCAGAGAGGGATTGATGTTGTACTCAATGATGAGTCCAAGCGTGAAACTCCTGCAGTCGTGTCCTTTGGTGACAAACAAAGGTTCATTGGAACAGCGGGGGCTGCATCTACTATGATGAACCCCAAGAATTCAATCTCACAGATAAAGCGACTAATTGGTAAAAAATTTTCTGACCCTGAATTGCAGCGGGATCTGAAGTTGTTGCCATATGCTGTCACTGAAGGGCCTGATGGATTTCCATTAATTCATGCACGGTATCTGGGTGAAGTTAGAACATTTACACCTATTCAAATCCTGGGAATGGTGTTGTCAGACCTCAAGGGCATAGCTGAAAAAAACCTGAATGCAGCCGTTGTTGATTGTTGCATTGGAATTCCAATTTATTTTACTGATCTTCAAAGAAGAGCAGTCTTAGATGCGGCCACAATTGCTGGTTTGCACCCTCTTCGCCTGATTCATGAAACAACAGCAACTGCCTTGGCTTATGGAATTTATAAAACAGATCTTCCTGAAAGTGATCAACTGAATGTTGCCTTCGTTGACATTGGACACGCTAGCATGCAAGTGTGCATTGCTGGCTTTAAAAAGGGGCAGCTGAAAGTATTGGCCCATTCATTTGATAGGTCTCTAGGTGGTAGAGATTTTGATGAGGTTTTGTTCCAGCACTTTGCTGCAAAATTTAAGGAGGAGTACAAGATTGATGTTTTCCAAAATGCCAGGGCTTGTTTAAGGCTCAGGGCTGCATGTGAGAAGCTGAAGAAGGTTCTCAGTGCAAATCCAGAGGCACCTCTAAACATTGAATGCTTAATGGATGAGAAAGATGTCAGGGGATACATGAAGCGTGAGGACTTTGAGCAACTAAGTTTCCCGATTTTGGAACGTGTGAAGAAACCTTTGGAGAAGGCATTGGCAGAAGCAGGCCTTACGGTTGAGAACGTTCACATGGTTGAGGTGGTTGGCTCAGGTTCTCGTGTACCAGCTATAAACAAAATATTGACAGAATTTTTCAAAAAGGAACCTAGGCGCACAATGAATGCTAGTGAGTGTGTTGCCAAAGGTTGTGCCTTGCAATGTGCAATTCTTAGTCCAACATTTAAAGTTCGAGAGTTTCAGGTCAATGAAAGCTTTCCCTTCTCAATTTCGTTGTCATGGAAAGGTTCTGGTTCAGATGCACAAGAAAGTGGACCGGATAATCATCAAAGTACTGTTGTTTTCCCCAAAGGCAATGTCATACCAAGTGTTAAGGCCCTGACATTCTATAGGTCAGGAACATTTTCTGTTGATGTACACTATGCTGATGTGAGTGAGCTGCAAGTACCTGCAAAGATTAGCACATATACTATTGGTCCTTTCCAAACTACTATGTTTGAAAAGGCAAAAGTTAAAGTAAAAGTTCGTCTGAATCTGCATGGAATTGTATTTGTTGAGTCAGCAACTCTCTTGGAGGAGGAAAATGTTGAGATTCCAGTAACCAAAGAACCAGAAGGAGAAAATGCTAAGATGGACGCTGATGAGGCTTCTACTAATGCTGCTGCACCTCCACCAAGTTCTAATGACACTGATGTCAATATGCAAGATGCCAAGGCAACTGCTGATACCCCTGGGGTTGAAAATGGCATCCCTGAGACAGCAGACAAGCCTGTGCAGATGGATACTGACACTAAGGCTGACGCTCCAAAGAAAAAGGTCAAGAAGACAAATATACCTTTATCAGAGCTGGTTTATGGAGCTATGACGCATGCAGATGTCCAGAAAGCAGTAGAGAAAGAGTTTGAAATGGCCTTACAAGATCGAGTGATGGAGGAAACCAAGGACAAGAAAAATGCAGTTGAGGCATATGTTTATGACATGAGAAACAAGCTTAGTGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGGGAGGAGTTTACTGCTAAACTTCATCAGGTAGAGGACTGGTTATATGAAGATGGTGAAGATGAGACCAAAGGTGTATATATAGCCAAACTTGAGGAACTCAAAAAGCAAGGAGATCCAATTGAAGAGCGTTACAAGGAATGCATGGAGAGGGGTACAGTAATTGATCAGTTCATATATTGCATAAATAGTTACAGAGAAGCTGCTATGTCAAATGATCCCAAATTCGATCACATTGACATTTCTGAGAAGGAGAAGGTATTAAATCAATGTGTGGAAGCTGAGGCCTGGCTTAGGGAGAAGAAGCAGCAGCAGGACTCACTTCCAAAATACGCCAACCCTGTACTCGTGTCAGCTGACATAAGAAAGAAAGCTGAGGGAGTTGATAGGTTTTGTAAGCCTATCATGACGAAACCAAAGCCCCCTCCCCCCAAGCCAGCTACTCCTGAAGCAACTGCAACCCCAACTCCTCAGGGTGGAGAGCAGCAGCAACCTCAGGGGGATGCTGACGCCAATGTTAAACCCAGTCCTAACGAGAATGCAGGAGACAGTGCTAGTCAGGTACCGCCACCATCTGCTGAACCAATGGAGACTGACAAGTCAGAGAACACAGGCTCTGCGTAA 2715 0.4372 MRLSSASSVVLECVHCIVWSAGGWRGYSLLGDQILSNRYIFFPANMSVVGFDVGNESCIVAVARQRGIDVVLNDESKRETPAVVSFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGKKFSDPELQRDLKLLPYAVTEGPDGFPLIHARYLGEVRTFTPIQILGMVLSDLKGIAEKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPESDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFQHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGYMKREDFEQLSFPILERVKKPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGSDAQESGPDNHQSTVVFPKGNVIPSVKALTFYRSGTFSVDVHYADVSELQVPAKISTYTIGPFQTTMFEKAKVKVKVRLNLHGIVFVESATLLEEENVEIPVTKEPEGENAKMDADEASTNAAAPPPSSNDTDVNMQDAKATADTPGVENGIPETADKPVQMDTDTKADAPKKKVKKTNIPLSELVYGAMTHADVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLSDKYQEFVTASEREEFTAKLHQVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKECMERGTVIDQFIYCINSYREAAMSNDPKFDHIDISEKEKVLNQCVEAEAWLREKKQQQDSLPKYANPVLVSADIRKKAEGVDRFCKPIMTKPKPPPPKPATPEATATPTPQGGEQQQPQGDADANVKPSPNENAGDSASQVPPPSAEPMETDKSENTGSA 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1817 904 Gene3D Actin; Chain A, domain 4 275 358 - -
Bisa10g1817 904 FunFam Heat shock 70 kDa protein 4 160 251 - -
Bisa10g1817 904 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 645 742 IPR029048 -
Bisa10g1817 904 SUPERFAMILY Actin-like ATPase domain 240 425 IPR043129 -
Bisa10g1817 904 CDD HSPA4_like_NDB 47 426 - -
Bisa10g1817 904 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 764 841 IPR029048 -
Bisa10g1817 904 MobiDBLite consensus disorder prediction 833 848 - -
Bisa10g1817 904 FunFam Heat shock 70 kDa protein 14 432 640 - -
Bisa10g1817 904 FunFam Heat shock 70 kDa protein 4 275 358 - -
Bisa10g1817 904 Pfam Hsp70 protein 48 743 IPR013126 GO:0005524|GO:0140662
Bisa10g1817 904 MobiDBLite consensus disorder prediction 849 884 - -
Bisa10g1817 904 PRINTS 70kDa heat shock protein signature 185 205 - -
Bisa10g1817 904 PRINTS 70kDa heat shock protein signature 377 393 - -
Bisa10g1817 904 PRINTS 70kDa heat shock protein signature 75 87 - -
Bisa10g1817 904 PRINTS 70kDa heat shock protein signature 47 60 - -
Bisa10g1817 904 PRINTS 70kDa heat shock protein signature 408 428 - -
Bisa10g1817 904 MobiDBLite consensus disorder prediction 612 626 - -
Bisa10g1817 904 MobiDBLite consensus disorder prediction 554 626 - -
Bisa10g1817 904 ProSiteProfiles Ig-like domain profile. 390 508 IPR007110 -
Bisa10g1817 904 Gene3D - 50 419 - -
Bisa10g1817 904 FunFam Heat shock 70 kDa protein 4 642 752 - -
Bisa10g1817 904 Gene3D - 642 751 IPR029048 -
Bisa10g1817 904 MobiDBLite consensus disorder prediction 828 904 - -
Bisa10g1817 904 FunFam Heat shock 70 kDa protein 4 46 122 - -
Bisa10g1817 904 Gene3D - 231 405 - -
Bisa10g1817 904 PANTHER HSC70CB, ISOFORM G-RELATED 46 896 - -
Bisa10g1817 904 SUPERFAMILY Actin-like ATPase domain 46 230 IPR043129 -
Bisa10g1817 904 Gene3D - 83 158 - -
Bisa10g1817 904 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 429 675 IPR029047 -
Bisa10g1817 904 FunFam Heat shock 70 kDa protein 4 83 158 - -
Bisa10g1817 904 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 432 639 IPR029047 -
Bisa10g1817 904 MobiDBLite consensus disorder prediction 574 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1817 Bisa-ChrBisa10 49458006 49463187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1817 49 483 Calmodulin-binding Proteins AT1G16030 35.616 1.62e-84 283