Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1811 ATGTATTCACCTGATAATTTAGGGCTTCCCACCACATCAACACCTTTTCCAAGATCATTTCAATTTCGTTGCGTTATTCCTTGTGAAGAATTACTTCAAGATATTCCTGGATTCCTCTTCTCAAAATTATCTAACTTTCTTTCTCACGATGAACTTCTACTAATAACACCTGGATTGATATCTGAAGTTCAATCAAGAACCCAGAATTATCATTCTATTTTTCAACCCACAGCTCGTCCTCAATTGATACCTTTGATTATAGATTTCCAAGTTCCTTTTACGGATGAAGAAGATCATGAAGAAGATGACGACATGATTAATTCAGTGATAGAGGAATCAATGCAACAAGTGGTTACCATTCCAGCATCAACGAAAGCCATAGCGTCACTCAAGAAAATTGAAGTGACAAGTGAGAAAGCTAAGATAGAACGATGTTGCATTTGCCTAGAGAGTTTTGAAGAAGACGACGACGTTTTAGGGATGCTGTGTGATCACATCTATCACAAAAATTGTATTGTGGAGTGGATGAAAATAAATCATACATGTCCATTGTGTCGCTTTGAAATGCCCACAAAGTAA 579 0.3679 MYSPDNLGLPTTSTPFPRSFQFRCVIPCEELLQDIPGFLFSKLSNFLSHDELLLITPGLISEVQSRTQNYHSIFQPTARPQLIPLIIDFQVPFTDEEDHEEDDDMINSVIEESMQQVVTIPASTKAIASLKKIEVTSEKAKIERCCICLESFEEDDDVLGMLCDHIYHKNCIVEWMKINHTCPLCRFEMPTK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1811 192 CDD RING-H2_PA-TM-RING 145 186 - -
Bisa10g1811 192 ProSiteProfiles Zinc finger RING-type profile. 145 186 IPR001841 -
Bisa10g1811 192 SUPERFAMILY RING/U-box 144 191 - -
Bisa10g1811 192 SMART ring_2 145 185 IPR001841 -
Bisa10g1811 192 Pfam Ring finger domain 144 186 IPR001841 -
Bisa10g1811 192 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 84 190 - -
Bisa10g1811 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 192 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1811 Bisa-ChrBisa10 49311220 49311798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1811 104 190 C3H Transcription Factor Family AT1G18760 33.333 1.16e-14 67.8