Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1776 ATGGCAGTATCAGAGAGGAGCTCGTCTCTGAACTTGAAGGAGACAGAGCTCAGGCTTGGGCTTCCTGGTTGTGAGTCTCCTGAGAGAAAATCTGGAGGTGGGGTTTCTCTGTTTGGGCGGGATTTGCAGAACAGTAAGAGCTCTCTGAAGAGGGGTTTCTCTGAAGCCATTGATGATGGGAAATGGGTTTTCTGTTCAGAGGGTGAAAATGATAATGCCCACAAGATTTCCCGGTTTAACAAAGCAATCCAGAATAAGAACCCTGAGGTTTCTGCAACAAAGGCACAGGTTGTGGGGTGGCCACCAATTCGATCATTTCGCAGGAACACAATGGCGTGTAATATGACAAAGAACAGCGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGGATCATGTGGGTGTCTGTATGTGAAGGTGAGTATGGATGGAGCTCCATATCTGAGGAAGGTTGATCTCAGAACCTACACCAACTATTTCCAACTTTCTTCAGCTCTTGAGAACATGTTCTCCTGCTTCACCATTGGTCAATGCAGTTCTGGAAAAGATGGGCTGATCAGTGAGAGGTGTTTGAGGGATCTTGTTGATGGGTGGGAGTATGTTCTTACATATGAAGATAAGGACGGAGACTGGATGCTTGTTGGAGATGTCCCATGGGAGATGTTCATAGAGTCCTGTAGGAGACTAAGGATCATGAAAGGTTCTGAGGCAATTGGGCTAGCTCCAAGGGCCATGGAAAAATCCAGAAGCTAA 759 0.4625 MAVSERSSSLNLKETELRLGLPGCESPERKSGGGVSLFGRDLQNSKSSLKRGFSEAIDDGKWVFCSEGENDNAHKISRFNKAIQNKNPEVSATKAQVVGWPPIRSFRRNTMACNMTKNSEEDEEEEEEEEEAGSCGCLYVKVSMDGAPYLRKVDLRTYTNYFQLSSALENMFSCFTIGQCSSGKDGLISERCLRDLVDGWEYVLTYEDKDGDWMLVGDVPWEMFIESCRRLRIMKGSEAIGLAPRAMEKSRS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1776 252 ProSiteProfiles PB1 domain profile. 137 236 IPR000270 GO:0005515
Bisa10g1776 252 FunFam Auxin-responsive protein 132 246 - -
Bisa10g1776 252 MobiDBLite consensus disorder prediction 21 40 - -
Bisa10g1776 252 SUPERFAMILY CAD & PB1 domains 137 235 - -
Bisa10g1776 252 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 241 IPR003311 GO:0005634|GO:0006355
Bisa10g1776 252 Pfam AUX/IAA family 14 245 IPR033389 -
Bisa10g1776 252 Gene3D - 132 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1776 Bisa-ChrBisa10 48407183 48409295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1776 139 248 B3 DNA Binding Superfamily AT1G19850 31.818 4.53e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa10g1776 AUX_IAA 2e-84 CL0072