Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1770 ATGGCAGGCATAGCTTTCGGACGTTACGATGAATCTTTCAGTTTGGTGTCCATAAAGGCCTATGTTGCAGAGTTCATATCCACCTCGCTCTATGTTTTTGCTGGTGTCGGTTCTGCCATTGCCTATGGGAAGTTGACGTCAGATGCAGCTCTCAGTCCTTCAGGGTTGGTGGCAATAGCAATATGCCATGGTTTTGCTCTATTTGTGGCTGTTGCCATTAGCGCCAACATCTCTGGAGGCCACGTCAATCCAGCTGTCACCTTCGGATTGGCTCAAGGAGGCCAGATCACCATCCTCACTGGCATCTTCTACTGGATTGCTCAGCTTCTTGGCTCCATTGTGGCTTGCTTGCTCCTCAAGTTTGTCACTGGAGGCTTGACAACACCGATCCACAGCCTCGGCGCCGGAGTCGGGGCAGCCGAAGCAGTGATGATGGAGATCATCATCACATTCTCACTGGTCTACACAGTGTACGCCACCGCCGCCGACCCCGGGAATGGCTCGCTCGGCACAATCGCCCCCATCGCCATCGGGCTCATCGTCGGCGCCAACATCCTCGCCGCCGGCCCATTCTCCGGCGGATCCATGAACCCTGCTCTCTCCTTCGGCCCCGCCGTCGTCAGCGGTGACTTCCATGGCAACTTGATCTACTGGATCGGACCTCTATTCGGTGGCGGCTTGGCCGGTCTCATATACGGCAACGTGTTCATGGCCCGAGAGCACACTTCTGGAAGGGGATCAGCTCCAGCGCCCACTCCGTCAGGGCACGCCACTCCGGTCTAGTTCATATCCACCTTGCTCTCTGTTGTTGCTAATGTTGGTTCTTCCATTGTCTATGGGAAGTTGACGACATATGCAGCTCTTAATCCTTCAGGTTTGGTGGCAATAGCAATATGCCATGGTCTTTTTATATTTGTGGCTATTGCCATTATCTTCAACATCTGCGGAGGCTACGGCATTCCAGCTATCACCTTAGGATTGGTTCTCGGTGGCCAGATCACCATCCTCACTGGCATCTTCTACTGGATTGCTCAGCTTCTTGGCTCCTTTATGGCTTACTTGCTCCTCTGTGTCACTGCAGGCTTGGTAATGACAACACCAATCCACAGCCTCGGCGCCGGAGTGGGAGCCGCCGAAGGAGTGGTGATAAGGATCATCATCACAATCACACTAGTCTACATAGCGTACGCCACCGCCACCGACCCCAAGAAGGGCCTCCTGGGCATAATTGCCCCCATTGCCATCGGGCTTATCGTCGTCGCCATCATCCTCGCCACCGGCCCATTCTCCGACAGATCCATCAACCCCGCTTGCTTTTTTGGCCATGCTTTCGTCAACGGCGACTTCAACAACAACTAG 1359 0.543 MAGIAFGRYDESFSLVSIKAYVAEFISTSLYVFAGVGSAIAYGKLTSDAALSPSGLVAIAICHGFALFVAVAISANISGGHVNPAVTFGLAQGGQITILTGIFYWIAQLLGSIVACLLLKFVTGGLTTPIHSLGAGVGAAEAVMMEIIITFSLVYTVYATAADPGNGSLGTIAPIAIGLIVGANILAAGPFSGGSMNPALSFGPAVVSGDFHGNLIYWIGPLFGGGLAGLIYGNVFMAREHTSGRGSAPAPTPSGHATPVXFISTLLSVVANVGSSIVYGKLTTYAALNPSGLVAIAICHGLFIFVAIAIIFNICGGYGIPAITLGLVLGGQITILTGIFYWIAQLLGSFMAYLLLCVTAGLVMTTPIHSLGAGVGAAEGVVIRIIITITLVYIAYATATDPKKGLLGIIAPIAIGLIVVAIILATGPFSDRSINPACFFGHAFVNGDFNNN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1770 452 Gene3D Glycerol uptake facilitator protein. 257 452 IPR023271 -
Bisa10g1770 452 Gene3D Glycerol uptake facilitator protein. 2 247 IPR023271 -
Bisa10g1770 452 Pfam Major intrinsic protein 15 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 Pfam Major intrinsic protein 262 451 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 SUPERFAMILY Aquaporin-like 262 450 IPR023271 -
Bisa10g1770 452 FunFam Probable aquaporin TIP1-1 2 249 - -
Bisa10g1770 452 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 PANTHER AQUAPORIN-8 4 240 IPR034294 -
Bisa10g1770 452 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1770 452 SUPERFAMILY Aquaporin-like 12 240 IPR023271 -
Bisa10g1770 452 ProSitePatterns MIP family signature. 81 89 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1770 Bisa-ChrBisa10 48325134 48332147 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1770 262 452 Major Intrinsic Protein MIP AT3G16240 63.021 2.48e-65 208