Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1767 ATGGCAGGCATAGCTTTCGGACGTTACGATGAATCTTTCAGTTTGGTGTCCATAAAGGCCTATGTTGCAGAGTTCATATCCACCTCGCTCTATGTTTTTGCTGGTGTCGGTTCTGCCATTGCCTATGGGAAGTTGACGTCAGATGCAGCTCTCAGTCCTTCAGGGTTGGTGGCAATAGCAATATGCCATGGTTTTGCTCTATTTGTGGCTGTTGCCATTAGCGCCAACATCTCTGGAGGCCACGTCAATCCAGCTGTCACCTTCGGATTGGCTCAAGGAGGCCAGATCACCATCCTCACTGGCATCTTCTACTGGATTGCTCAGCTTCTTGGCTCCATTGTGGCTTGCTTGCTCCTCAAGTTTGTCACTGGAGGCTTGACAACACCGATCCACAGCCTCGGCGCCGGAGTCGGGGCAGCCGAAGCAATGATGATGGAGATCACATTCTCACTGGTCTACACAGTGTACGCCACCGCCGCCGACCCCGGGAATGGCTCGCTCGGCACAATCGCCCCCATCGCCATCGGGCTCATCGTCGGCGCCAACATCCTCGCCGCCGGCCCATTCTCCGGCGGATCCATGAACCCTGCTCTCTCCTTCGGCCCCGCCGTCGTCAGCGGCGACTTCCATGGCAACTTGATCTACTGGATCGGACCTCTATTCGGTGGCGGCTTGGCCGGTCTCATATACGGCAACGTGTTCATGGCCCGAGAGCACACTTCTGGAAGGGGATCAGCTCCAGCGCCCACTCCGTCAGGGCACGCCACTCCGGTCTAGTTCATATCCACCTTGCTCTCTGTTGTTGCTAATGTTGGTTCTTCCATTGCCTATGGGAAGTTGACGACATATGCAGCTCTTAGTCCTTCAGGTTTGGTGGCAATAGCAATATGCCATGGTCTTTTTATATTTGTGGCTATTGCCATTATCTTCAACATCTGTGGAGGCTACGGCATTCCAGCTATCACCTTAGGATTGGTTCTCGGTGGCCAGATCACCATCCTCACTGGCATCTTCTACTGGATTGCTCAGCTTCTTGGCTCCTTTATGGCTTGCTTGCTCCACTGTGTCACTGGAGGCTTGGTAATGAGTCGGAGCCGACGAAGGAGTGGTGATAAGGATCATCATCACAATCGCACTAGTCTACACAGCATACGCCACCGCCACCGACCCCAAGAAGGGCCTGCTGGGCATAATTGCCCCCCATTGCCATCGGGCTTATCGTCGTCGCCATCATCCTCGCCACTGGCCCATTCTCCGACAGATCCATCAACCCCGCCTGCTTTTTTGACCATGGTTTCGTCGACGGCGACTTCAACGACAACTGGATCCAATGGATCGGATCTCTTGTCGGCATTAGCTTGGCCGGTCTCATCTACAGCAAGTGTTCATGGCCTAAGAGCACCTCCTCTGGCCAGTGAATGTTGA 1425 0.5425 MAGIAFGRYDESFSLVSIKAYVAEFISTSLYVFAGVGSAIAYGKLTSDAALSPSGLVAIAICHGFALFVAVAISANISGGHVNPAVTFGLAQGGQITILTGIFYWIAQLLGSIVACLLLKFVTGGLTTPIHSLGAGVGAAEAMMMEITFSLVYTVYATAADPGNGSLGTIAPIAIGLIVGANILAAGPFSGGSMNPALSFGPAVVSGDFHGNLIYWIGPLFGGGLAGLIYGNVFMAREHTSGRGSAPAPTPSGHATPVXFISTLLSVVANVGSSIAYGKLTTYAALSPSGLVAIAICHGLFIFVAIAIIFNICGGYGIPAITLGLVLGGQITILTGIFYWIAQLLGSFMACLLHCVTGGLVMSRSRRRSGDKDHHHNRTSLHSIRHRHRPQEGPAGHNCPPLPSGLSSSPSSSPLAHSPTDPSTPPAFLTMVSSTATSTTTGSNGSDLLSALAWPVSSTASVHGLRAPPLASEC 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1767 474 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 PRINTS Major intrinsic protein family signature 213 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 CDD MIP 19 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 MobiDBLite consensus disorder prediction 369 385 - -
Bisa10g1767 474 Gene3D Glycerol uptake facilitator protein. 2 245 IPR023271 -
Bisa10g1767 474 Gene3D Glycerol uptake facilitator protein. 255 407 IPR023271 -
Bisa10g1767 474 FunFam Probable aquaporin TIP1-1 2 246 - -
Bisa10g1767 474 SUPERFAMILY Aquaporin-like 12 238 IPR023271 -
Bisa10g1767 474 MobiDBLite consensus disorder prediction 402 446 - -
Bisa10g1767 474 PANTHER AQUAPORIN-8 258 365 IPR034294 -
Bisa10g1767 474 Pfam Major intrinsic protein 260 360 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 Pfam Major intrinsic protein 15 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1767 474 SUPERFAMILY Aquaporin-like 260 356 IPR023271 -
Bisa10g1767 474 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Bisa10g1767 474 MobiDBLite consensus disorder prediction 366 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1767 Bisa-ChrBisa10 48304373 48311493 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1767 260 370 Major Intrinsic Protein MIP AT3G16240 62.500 8.31e-33 123