Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1760 ATGGCAGGCATAGCTTTCGGACGTTACGATGAATCTTTCAGTCTGGTGTCCATGAAGGCCTATGTTGCAGAGTTCATATCCACCTTGCTCTATGTTTTTGCTGGTGTCGGTTCTGCCATTGCCTATGGGAAGTTGACGTCAGATGCAGCTCTCAGTCCTTCAGGGTTGGTGGCAATAGCAATATGCCATGGTTTTGCTCTATTTGTGGCTGTTGCCATTAGCGCCAACATCTCTGGAGGCCACGTCAATCCAGCTGTCACCTTCGGATTGGCTCAAGGAGGCCAGATCACCATCCTCACTGGCATCTTCTACTGGATTGCTCAGCTTCTTGGCTCCATTGTGGCTTGCTTGCTCCTCAAGTTTGTCACTGGAGGCTTGACAACACCGATCCACAGCCTCGGCGCCGGGGTCGGGGCCGCCGAAGGAGTGTTGATGGAGATCATCATCACATTCTCACTGGTCTACACAGTGTACGCCACCGCCGCCGACCCCGGGAATGGCTCGCTCGGCACAATCGCCCCCATCGCCATCGGGCTCATCGTAGGTGCCAACATCCTAGCCGCCGGCCCATTCTCCGGTGGATCCATGAACCCTGCTCTCTCCTTCGGCCCCGCAGTTGTCAGCGGCGACTTCCACGGCAACTTGATCTACTGGATCGGACCTCTGTTCGGCGGCGGCTTGGCCGGTCTCATATACGGCAACGTGTTCATGGCCTCAGAGCACACTCCTGGAAGGGGATCAGCTCCAGCGCCCACGCCGTCAATGCCAGCCATTCTGGTCTGTGACTACCGAGCATGCCGTCCTCCTCTGTAA 813 0.5658 MAGIAFGRYDESFSLVSMKAYVAEFISTLLYVFAGVGSAIAYGKLTSDAALSPSGLVAIAICHGFALFVAVAISANISGGHVNPAVTFGLAQGGQITILTGIFYWIAQLLGSIVACLLLKFVTGGLTTPIHSLGAGVGAAEGVLMEIIITFSLVYTVYATAADPGNGSLGTIAPIAIGLIVGANILAAGPFSGGSMNPALSFGPAVVSGDFHGNLIYWIGPLFGGGLAGLIYGNVFMASEHTPGRGSAPAPTPSMPAILVCDYRACRPPL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1760 270 FunFam Probable aquaporin TIP1-1 2 246 - -
Bisa10g1760 270 SUPERFAMILY Aquaporin-like 11 241 IPR023271 -
Bisa10g1760 270 Gene3D Glycerol uptake facilitator protein. 2 245 IPR023271 -
Bisa10g1760 270 Pfam Major intrinsic protein 15 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1760 270 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1760 270 PANTHER AQUAPORIN-8 4 240 IPR034294 -
Bisa10g1760 270 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Bisa10g1760 270 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1760 270 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1760 270 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1760 270 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1760 270 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa10g1760 270 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1760 Bisa-ChrBisa10 48261611 48263850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1760 1 243 Major Intrinsic Protein MIP AT3G16240 80.328 3.50e-137 385