Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1752 ATGACGACGACGACGACACAGCCCACAGAACTACCGACGTGTTCCGAAACCACCACCACTTCTTCTTCTACTTCTTCTTCATCTTCGATCTCAAAGTCAAAACCCCAAGACTCTGTTTCGAAGTCACACTCAGAACAGAGCAGACCCACCAAGAGACTCAGAACAGAGCAGAACCACCCACACTACCATGGAGTCCGAATGCGAAGCTGGGGCAAGTGGGTCTCCGAGATTCGCGAGCCCCGCAAGAAATCTCGCATCTGGCTCGGCACCTTCGCCACCCCCGAAATGGCTGCTCGAGCCCACGACGTCGCCGCCCTCACCATCAAAGGCAAGTCCGCCATTCTCAACTTCCCCCACATCGCCGGCGTCCTGCCCCGCCCAGCCACGTGCACCCCACGTGACATCCAGGCCGCGGCATCTGCGGCCGCCGCCATGGTCAAATTCGACCCTGTGAGGCTGCCGGAGGCGTCCGAGGAAACGTCCGAGTCGTCGTCGTCGGAGCTGAGTGAGATAGTGGAGTTGCCGAACATAGAAGAACAGAGCTTTGACTCGGCCGAGTCCATACCCGAGTTCATATGGATTGACTCGGTGGATAGCTGGGTGTTTCCGGGTACGGATACGGGTTGGGATGAAGGGGATCGGAGCTCCATTTTCTCAGAACAGTTCGCTCAAGAGACCTGTGAGATAATATCACTTTGGGATTGA 705 0.5688 MTTTTTQPTELPTCSETTTTSSSTSSSSSISKSKPQDSVSKSHSEQSRPTKRLRTEQNHPHYHGVRMRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALTIKGKSAILNFPHIAGVLPRPATCTPRDIQAAASAAAAMVKFDPVRLPEASEETSESSSSELSEIVELPNIEEQSFDSAESIPEFIWIDSVDSWVFPGTDTGWDEGDRSSIFSEQFAQETCEIISLWD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1752 234 MobiDBLite consensus disorder prediction 1 37 - -
Bisa10g1752 234 Gene3D AP2/ERF domain 61 120 IPR036955 GO:0003700|GO:0006355
Bisa10g1752 234 FunFam Ethylene-responsive transcription factor 2 61 119 - -
Bisa10g1752 234 CDD AP2 60 119 IPR001471 GO:0003700|GO:0006355
Bisa10g1752 234 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Bisa10g1752 234 MobiDBLite consensus disorder prediction 1 64 - -
Bisa10g1752 234 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Bisa10g1752 234 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Bisa10g1752 234 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Bisa10g1752 234 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Bisa10g1752 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 33 183 - -
Bisa10g1752 234 MobiDBLite consensus disorder prediction 38 63 - -
Bisa10g1752 234 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1752 Bisa-ChrBisa10 48076813 48077517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1752 37 203 AP2-EREBP Transcription Factor Family AT5G11590 53.763 2.20e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g1752 AP2 2.2e-13 CL0081