Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1748 ATGTCAATGGAAGTGCCGGAGTACTTTGTCGGTGGCTACTTCGGCGCCGGAGGGGACCAATTCTCGACGGAGAAGCGCCACGGCGGCGATCAGAAGGTCGGGGAGCCTTTCGCCATTGACGATCTACTTGACTTCTCGAACGCAGACGCCATGATCATGTCCGACGGTTTTTTCGACAATGCAGCCGGAAACTCCATCGACTCATCTACCGTCACCGCCGTTGACAGTTGTAATTCCTCCATCTCAGGTGGAGACAACCATTTCTCCGGGGGCTTCGGCAATCCTCAATTCTCCGGAGAACTCTGCGTTCCGTATGACGACATGGCTGAGCTGGAATGGCTATCGAACTTCGTGGAGGACTCGTTCTCAGTTGAAGATGAGCTAAAGACGCTACACCTTCTCTCCAGCACCACCACCGCTTCCGCCATTGGCGCGAAACCTCAAACACCAGAGTCGTCCTCTTCCTCCGAACCGCTTCCACCATTCGCTGCCGACACCGCTGGAAACGCACCGTTTTTCCATCCGGAAACTCCTCTCCCTGGTAAAGCAAGGAGCAAGCGTTCACGCGCCGCCCCGGGGGACTGGTCCACGCGACTCCTCCACCTGATCACGCCGACGGCCGAACCGGCACCGGAGCAGGGGAAGGCGTCTGCGGCGACGATGAAGAGGAGGGACAGTTCGAATTCGGAGTCGGCGGGCCGGAAATGCCTGCACTGCGCCGCGGAGAAGACGCCGCAATGGCGGACTGGACCCATGGGTCCGAAGACGCTGTGCAATGCTTGCGGAGTGCGGTACAAGTCGGGGAGGCTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTTGTATCGACGAAGCACTCGAATTCTCACCGGAAGGTGGTTGAGCTGAGGAGGCAGAAGGAGATGCAACAGCAGCAATTGCTGAGCCAGAGTTCAATTTTTGGGGTCTCTCATGGCGGAGACGAGTACTTGATTCACCACCACAGTGGTCCAGATTACAGGCATATCATCTAG 1017 0.5831 MSMEVPEYFVGGYFGAGGDQFSTEKRHGGDQKVGEPFAIDDLLDFSNADAMIMSDGFFDNAAGNSIDSSTVTAVDSCNSSISGGDNHFSGGFGNPQFSGELCVPYDDMAELEWLSNFVEDSFSVEDELKTLHLLSSTTTASAIGAKPQTPESSSSSEPLPPFAADTAGNAPFFHPETPLPGKARSKRSRAAPGDWSTRLLHLITPTAEPAPEQGKASAATMKRRDSSNSESAGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSTKHSNSHRKVVELRRQKEMQQQQLLSQSSIFGVSHGGDEYLIHHHSGPDYRHII 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1748 338 PIRSF Txn_fac_GATA_plant 22 321 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bisa10g1748 338 MobiDBLite consensus disorder prediction 141 233 - -
Bisa10g1748 338 Pfam GATA zinc finger 236 269 IPR000679 GO:0006355|GO:0043565
Bisa10g1748 338 CDD ZnF_GATA 235 282 IPR000679 GO:0006355|GO:0043565
Bisa10g1748 338 ProSiteProfiles GATA-type zinc finger domain profile. 230 266 IPR000679 GO:0006355|GO:0043565
Bisa10g1748 338 Gene3D - 226 308 IPR013088 GO:0006355|GO:0008270
Bisa10g1748 338 ProSitePatterns GATA-type zinc finger domain. 236 261 IPR000679 GO:0006355|GO:0043565
Bisa10g1748 338 MobiDBLite consensus disorder prediction 141 160 - -
Bisa10g1748 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 232 293 - -
Bisa10g1748 338 SMART GATA_3 230 280 IPR000679 GO:0006355|GO:0043565
Bisa10g1748 338 FunFam GATA transcription factor 225 311 - -
Bisa10g1748 338 PANTHER GATA TRANSCRIPTION FACTOR 35 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1748 Bisa-ChrBisa10 48002825 48004107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1748 35 338 C2C2-Gata Transcription Factor Family AT4G32890 49.045 3.96e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa10g1748 GATA 2e-14 CL0167