Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1744 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGAGCAGCAGCAAAGAAACAGCAAGAGAAGCAGCCGGTTAATCCGATCGTGGAAGGGGAAGCGATTGCAACAAGGACAAGGAGAAGGCGGGCGGCGGCGGCGGCAGCAGCAGGGCCGAAGAATAACAAACAACAGCAACAGGCGGTGGTCAATGACAACGTAGTTGTCTCGGCCAAGGAGGAGGAAGCGAATAGGGGTTTGGACGAAGTTCTTCTCCTTGTTGGTACAACTGGTGGGGCCAGTGGTGACGTGGGTGACGCTTGCGGAGCGGAGAAGGAAGAGATAGGGGAGAAGCTAATGGATGACCACGATAGTGGAGCACGGAGCAAAGATAAGGCCAAAGTTGGTGAAGATGAGGGGAGCACCGCTCCGGTTCCTGAAAGGGTTCAAGTTGGTGGTTCCCCATTGTATAAAGTAGAAAGGAAACTGGGAAAGGGTGGATTTGGACAAGTATATGTTGGTCGCCGTGTCAATCCTGTAAATATGAATGAGAGAACTGGATCTGCAGCTGTGGAGGTTGCATTAAAATTTGAGCACAGAAGTAGTAAAGGATGTAACTATGGACCACCACATGAGTGGCAAGTGTACAACACCCTTGGTGGCAGTCATGGTGTGCCAAAAGTACACTACAAGGGTAGGCAAAGTGACTATTATGTCATGGTTATGGATATGTTGGGACCCAGCTTGTGGGATGTCTGGAATAATAACTCTCACTCAATGTCCACTGAAATGGTTGCATGTATTGCCATTGAAGCAATATCCATATTGGAGAAGATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTACTCCTGGGACCCCAGATGAGAAAAAATTGTTCCTTGTTGATCTTGGATTAGCTACTAGATGGCGGGATACTACAACAGGTTTTCATGTGGACTATGACCAAAGACCAGATGTTTTTCGGGGCACAGTTCGCTACGCTAGTGTGCATGCGCATTTAGGGAGAACTGCCAGCAGGAGGGATGATCTGGAATCTCTTGCTTATACACTTGTTTTCCTTCTTCGAGGTCGCCTTCCTTGGCAGGGTTACCAGGGAGAAAACAAAGGGTTTTTTGTTTGCAAGAAGAAGATGGGAACAACTCCTGAGGGCCTATGTTGCTTCTGCCCCCAGCCTTTTAAGCTGTTTGTTGAACATGTAGTGAATTTGAAGTTTGATGAAGATCCTAACTATGCAAAATATGTTTCTCTGTTTGTTGGGATTGTTGGTCCAAATCCTGATATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGTCGGTTGGCCTTGGAAGAAGATGGTGACGAACAACCAAAAAAGAAGTTCCGCATGGGTCTGCCAGCAACACAGTGGATAAGTATATACAATGCTCGAAAACCAATGAAACAAAGATATCACTACAATGTTTCAGATACAAGGTTGTCCCAGCACATTGAGAAAGGAAACGAGGATGGCTTATATATAAGCAGTGTGGCTTCATGTCAGAACCTGTGGGCCATAATCATGGATGCAGGCACTGGTTTCACTGACCAAGTTTATGAACTCTCCCATTACTTTCTCCACAAGGAATGGATAATGGAGCAATGGGAAAAAAATTACTATATCAGTGCAATTGCTGGATCTACCAATGGGAGCTCATTAGTAGTCATGTCTAAGGGCACACCATATGTGCAGCAATCGTACAAAGTTAGTGATTCATTTCCGTATAAGTGGATTAACAAAAAATGGAGGGAAGGCTTCTACGTTACAGCAATGGCCACGTCCGGGAGTAGATGGGGTGTTGTTATGTCTCGTGGTGCAGGATTTTCTGACCAGGTGGTCGAACTAGATTTTCTTTACCCCAGTGAAGGGATTCACAAGCGGTGGGATTGTGGATACCGCATCACAGCAACTGCTGCAACTAGGGATCAAGCTGCTTTTGTCCTCAGTGTTCCGAAGAAGAAGCCTGCGGATGAAACACAGGAAACTCTCAGGACTACTGCTTTTCCTAGTACACATGTCAAGGAGAAATGGGCAAAGAACCTTTATATTGCATCAGTTTGCTATGGACGAACAGTTTCTTGA 2139 0.4628 MPVLRSGVRRGRAAAKKQQEKQPVNPIVEGEAIATRTRRRRAAAAAAAGPKNNKQQQQAVVNDNVVVSAKEEEANRGLDEVLLLVGTTGGASGDVGDACGAEKEEIGEKLMDDHDSGARSKDKAKVGEDEGSTAPVPERVQVGGSPLYKVERKLGKGGFGQVYVGRRVNPVNMNERTGSAAVEVALKFEHRSSKGCNYGPPHEWQVYNTLGGSHGVPKVHYKGRQSDYYVMVMDMLGPSLWDVWNNNSHSMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGTPGTPDEKKLFLVDLGLATRWRDTTTGFHVDYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFFVCKKKMGTTPEGLCCFCPQPFKLFVEHVVNLKFDEDPNYAKYVSLFVGIVGPNPDIRPINTEGAQKLIGHKRGRLALEEDGDEQPKKKFRMGLPATQWISIYNARKPMKQRYHYNVSDTRLSQHIEKGNEDGLYISSVASCQNLWAIIMDAGTGFTDQVYELSHYFLHKEWIMEQWEKNYYISAIAGSTNGSSLVVMSKGTPYVQQSYKVSDSFPYKWINKKWREGFYVTAMATSGSRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITATAATRDQAAFVLSVPKKKPADETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTVS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1744 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Bisa10g1744 712 CDD STKc_CK1 148 424 - -
Bisa10g1744 712 PANTHER CASEIN KINASE-RELATED 148 680 - -
Bisa10g1744 712 MobiDBLite consensus disorder prediction 108 140 - -
Bisa10g1744 712 SMART serkin_6 148 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1744 712 MobiDBLite consensus disorder prediction 108 129 - -
Bisa10g1744 712 Gene3D Transferase(Phosphotransferase) domain 1 113 444 - -
Bisa10g1744 712 ProSiteProfiles Protein kinase domain profile. 148 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1744 712 Pfam Protein kinase domain 148 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1744 712 FunFam casein kinase 1-like protein HD16 121 468 - -
Bisa10g1744 712 SUPERFAMILY Protein kinase-like (PK-like) 148 428 IPR011009 -
Bisa10g1744 712 ProSitePatterns Protein kinases ATP-binding region signature. 154 187 IPR017441 GO:0005524
Bisa10g1744 712 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1744 Bisa-ChrBisa10 47906740 47913111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1744 107 373 AGC Kinase Gene Family AT3G08730 24.074 5.78e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bisa10g1744 Pkinase 2.5e-17 CL0016