Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1738 ATGACTCGGAGGTGCTCTCACTGTAGCAACAACGGGCACAACTCCCGAACATGCCCGGCCCGTGGTGGCGGCGGCGGTAGTGGCGGAGGTGTGAAGCTCTTCGGTGTTAGACTCACCGATGGATCAATCATCAAAAAGAGCGCGAGTATGGGGAATCTCTCTGCTTATTACCATTCATCTTCGTCCGCCGCTGGATCACCGAATCCCGGTTCGCCTTGTTCCGACCCGTTCCGAGACCCGGGTCATGAATCTGACGGGTGCTTGTCCGATGACCCATCTCATGCCTCCAGTTCGGCGAACCGCCGAGGAGAAAGAAAAAAAGGCGTTCCATGGACCGAAGAAGAACATCGCATGTTCTTAATTGGTCTCCAAAAGCTGGGTAAAGGAGACTGGCGTGGTATAGCACGCAATTTTGTTGTATCAAGGACCCCTACTCAAGTAGCAAGTCATGCACAAAAATACTTCATCCGGCAGAGTAATGCCACTCGTAGAAAGAGACGTTCCAGCCTTTTTGACATGGTACCGGATATGGCTTCAGATCCACCTTCAGTGCCAGAAGAACAAGTATTACTGCCACCTTCCGAGAACTCACAACCTGGTAGTGCTAAATCACAGCCATCATTAGATCTCTCCCTCAAGTCAGAATTTGAACCCATGGAAACTAACTTTCAAGAAAATGTGGAAGAGCCCAATGAAACTATGATAACATCAAGTGGAATGACACCAGTGGCTACTGGATTCATACCAGCATATGTACCTGTTCCATTTTCCATATGGCCATCAACTCCCTTTGAAGAAGTCACTGGAGCTGAGCCATCTCATCATCCGGTCCTCAAGCCAATCCCAGTCATTGCCAAGAAACCTGTCAATGTTAATGAACTTGTTGGCATGTCTCAGCTGAGTATTGGGGAAATTAAGGTACCTGATGGAGAGCCTCCTCCACTATCCCTGAAGTTGCTAGGAGAGCCTTCAAGGCAGTCAGCATTCCATGCCAATGCTCCGGTTGGTGGTTCAGAATTAAAGAATGGCAAGAACAGCGCAATTCAAGCAGTTTAA 1056 0.4886 MTRRCSHCSNNGHNSRTCPARGGGGGSGGGVKLFGVRLTDGSIIKKSASMGNLSAYYHSSSSAAGSPNPGSPCSDPFRDPGHESDGCLSDDPSHASSSANRRGERKKGVPWTEEEHRMFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDMASDPPSVPEEQVLLPPSENSQPGSAKSQPSLDLSLKSEFEPMETNFQENVEEPNETMITSSGMTPVATGFIPAYVPVPFSIWPSTPFEEVTGAEPSHHPVLKPIPVIAKKPVNVNELVGMSQLSIGEIKVPDGEPPPLSLKLLGEPSRQSAFHANAPVGGSELKNGKNSAIQAV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1738 351 MobiDBLite consensus disorder prediction 57 110 - -
Bisa10g1738 351 Gene3D - 111 160 - -
Bisa10g1738 351 MobiDBLite consensus disorder prediction 1 17 - -
Bisa10g1738 351 SMART sant 107 157 IPR001005 -
Bisa10g1738 351 SUPERFAMILY Homeodomain-like 105 160 IPR009057 -
Bisa10g1738 351 CDD SANT 110 155 IPR001005 -
Bisa10g1738 351 ProSiteProfiles SANT domain profile. 111 159 IPR017884 -
Bisa10g1738 351 Pfam Myb-like DNA-binding domain 110 155 IPR001005 -
Bisa10g1738 351 ProSiteProfiles Myb-like domain profile. 103 155 IPR001005 -
Bisa10g1738 351 FunFam transcription factor MYB1R1 109 160 - -
Bisa10g1738 351 MobiDBLite consensus disorder prediction 1 26 - -
Bisa10g1738 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 159 IPR017930 -
Bisa10g1738 351 PANTHER TRANSCRIPTION FACTOR KUA1 3 264 - -
Bisa10g1738 351 MobiDBLite consensus disorder prediction 328 351 - -
Bisa10g1738 351 MobiDBLite consensus disorder prediction 173 208 - -
Bisa10g1738 351 NCBIfam myb-like DNA-binding domain, SHAQKYF class 106 158 IPR006447 GO:0003677
Bisa10g1738 351 MobiDBLite consensus disorder prediction 190 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1738 Bisa-ChrBisa10 47695995 47699206 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa10g1738 Myb_DNA-binding 2.8e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1738 10 47695995 47699206 Bisa10g1738 10 47695995 47699206 ECH