Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1734 ATGAATCTCGTACGGAAAACCCACTTGAAGTTTCTGCTTCACGTTCTCCTCTTCCTCCTCCACCTTCACTCCCTCTGTTCCCACACCACACCCATGAGTTGTACGGACACATCCCGCGTTTGCACTTCTTTCTTGGCCTTCAAGCCTCAAAAACCCCAAACCCTGGCCTTAATTCAGAGCATGTTCGATGTATTGCCCAGTGACGTCACCGTTGAAGGCAATGGAAGGGACTACATATACATCAAAAAGAACTGTTCTTGTGCTGATGGCATAAAGAAATACACATCCTACACCACTTTCACCGTCAAATCCAACGAAGGGTTTGTGTATGACTTGGTGATGGAGGCCTACGAGGGGCTTGCCTTCTTTCCCAACACCACCAGGAGGGCCAAAAACGGCGCCATCATATCAGTGAGGTTGTTCTGTGGCTGCTCAACTGGACCCTGGAACTATATGGTGAGTTATGTGATGAGAGAAGGGGATAGCATTCAATCTTTGGCGAGTCGGTTTGGAGTTAGTATGGATAGTATAGAGACGGTGAATGGCATCAACAATCCAGATAATGTCACTGTGGGTTCTCTGTATTATATTCCTCTTAATTCGGTTCCTGGTGAGCCATATCCCCTCAAGAATGATACTCCTCCAACTCCTGTTCCTGCTCCATCTGCTGGCGATGTTTCTGCTAATCAAGTCAATCATGAGGCTCATGGACCCTACCTATGGATCATTGTGGGTTTAGGGGTTGGTCTTACTCTGATAATACTAAGCATAATACTTTACTTCTGTGTGAGATCATCCCCTTGTTTTTCTGTTCATGCAAAAGATGGTGAGGCCAGTGTCTCTCACAAATTTCATATTCTTCAAAATCCAAGCTTTTGCTGTGGTTCCGGAAGGTACACATATGGCAAACCTGTAGACCAGAGGGACACTGATTGTGAATCCAGCAACCTCCAGATTAACACTCCCAAAGTTTCAACTAAAGGGATTGATGTGTTTGAAGTGGAGAATCCTCTAGTTTTTACATTTGAAGATATTTTTTCCTCAACTGATGGTTTCTGTGAGTCAAATCTACTTGGGCATGGAACTTATGGTTCTGTTTACTTTGGCTTTCTTCGTGAACAGGAGGTTGCTATTAAAAGAATGACAGCAACAAAAACTAAAGAGTTCTTATCAGAGATGAAGGTTCTGTGCAAGGTTCATCATGCAAATCTGGTAGAGTTGATCGGTTATGCGGCTAGTCACGATGAGTTTTTCCTTATTTATGAATACGCTCAGAAAGGTTCACTTGGAAGCCATTTGCATGATTCTCAGACTAAGGGTTCTTCATCACTTTCTTGGATCATGAGGGTTCAGATTGCACTTGACGCTGCTAGGGGCCTTGAGTACATACATGAGCACACCAAAACTCATTATGTCCTCCATAGAGATATCAAGACAAGCAACATATTACTTGATTCTTCCTTTAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTAATAAAGCAAATGAGGGAGATATTACCGTCACCAAAGTCGTTGGCACATATGGTTATCTTGCTCCAGAATACTTGAGTGATGGCCTTGCAACGGCCAAAAGTGATGTCTATGCATTTGGCATTGTTCTTTTTGAGATTATATCAGGGAAGGAGGCCACTATTCGTACAGAAGGTACAACAACAAAAAATCCCGAAAGACGTTCATTGGCATCTATTATGTTAGCTGCTCTGAGAAATTCCCCTGATTCCATGAGCATGGCAAGTTTGAGGGATCACATTGATCCTAATATGTTGAATCTGTATCCCCATGATTGTGTATACAAGATGGCCATGCTGGCAAAGCAATGTGTGGATGATGATCCCATCTTAAGACCTGATATGAAGCAAGTTGTGATTTCCCTCTCACAGATCCTTCTGTCTTCTGTTGAGTGGGAAGCAACTCTTGCTGGGAACAGCCAGGTATTCAGTGGCCTTGTTCAGGGAAGATAG 1992 0.4322 MNLVRKTHLKFLLHVLLFLLHLHSLCSHTTPMSCTDTSRVCTSFLAFKPQKPQTLALIQSMFDVLPSDVTVEGNGRDYIYIKKNCSCADGIKKYTSYTTFTVKSNEGFVYDLVMEAYEGLAFFPNTTRRAKNGAIISVRLFCGCSTGPWNYMVSYVMREGDSIQSLASRFGVSMDSIETVNGINNPDNVTVGSLYYIPLNSVPGEPYPLKNDTPPTPVPAPSAGDVSANQVNHEAHGPYLWIIVGLGVGLTLIILSIILYFCVRSSPCFSVHAKDGEASVSHKFHILQNPSFCCGSGRYTYGKPVDQRDTDCESSNLQINTPKVSTKGIDVFEVENPLVFTFEDIFSSTDGFCESNLLGHGTYGSVYFGFLREQEVAIKRMTATKTKEFLSEMKVLCKVHHANLVELIGYAASHDEFFLIYEYAQKGSLGSHLHDSQTKGSSSLSWIMRVQIALDAARGLEYIHEHTKTHYVLHRDIKTSNILLDSSFRAKISDFGLAKLVNKANEGDITVTKVVGTYGYLAPEYLSDGLATAKSDVYAFGIVLFEIISGKEATIRTEGTTTKNPERRSLASIMLAALRNSPDSMSMASLRDHIDPNMLNLYPHDCVYKMAMLAKQCVDDDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1734 663 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 21 657 IPR044812 GO:0019199|GO:0045087
Bisa10g1734 663 Pfam Protein tyrosine and serine/threonine kinase 356 633 IPR001245 GO:0004672|GO:0006468
Bisa10g1734 663 Gene3D Phosphorylase Kinase; domain 1 324 423 - -
Bisa10g1734 663 Gene3D Transferase(Phosphotransferase) domain 1 425 650 - -
Bisa10g1734 663 ProSitePatterns Protein kinases ATP-binding region signature. 358 379 IPR017441 GO:0005524
Bisa10g1734 663 FunFam Kinase family protein 328 423 - -
Bisa10g1734 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Bisa10g1734 663 SUPERFAMILY LysM domain 153 198 IPR036779 -
Bisa10g1734 663 ProSiteProfiles Protein kinase domain profile. 352 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1734 663 Gene3D LysM domain 149 204 IPR036779 -
Bisa10g1734 663 SUPERFAMILY Protein kinase-like (PK-like) 331 635 IPR011009 -
Bisa10g1734 663 FunFam PTI1-like tyrosine-protein kinase 3 424 649 - -
Bisa10g1734 663 ProSiteProfiles LysM domain profile. 153 197 IPR018392 -
Bisa10g1734 663 Pfam LysM domain 155 192 IPR018392 -
Bisa10g1734 663 SMART LysM_2 154 198 IPR018392 -
Bisa10g1734 663 SMART serkin_6 352 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1734 Bisa-ChrBisa10 47432321 47437722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1734 31 663 Receptor kinase-like Gene Family AT1G51940 66.459 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa10g1734 PK_Tyr_Ser-Thr 3.2e-48 CL0016