Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1732 ATGAATGGAAGGTCAAAAAACGAGGAGGGGTCTCCTCAGCTGCTAGATTTAATCCCAAAAGACAGAGAGTGGCATGTAAACAGAGACGACCAGTCTTCAGAGGAGAGGAAGCTTGAGCTCAGACTTGGTCCACCAGGTGAGGAAGAAGACTATGTCGTCAGGGAGAGAGACGACTCTCGACTCTCTCTGCGGTACTACTCAAACTCGCCCTCCATCAATGGAGGCAGAAACCAGAACATTTTGTCTTCTCCTTGGGCTTGCATAGGGAAGAAGACTCAGAATAATCAACACATGGGGGCTTCATCATCATCATCTCTTCACTCACAACCCTCTTCTGCAAATACAGCTGTACCCAACAGCTCTCAGAAAAGAACGGCTTCTGGTCCAGTTGTGGGGTGGCCTCCAATTCGTTCATTTAGGAAGAACCTTGCAAGCAGCAGCTCTTCTAAGCCACCCCATGAGTCCCAGAATCAGCATGTGATTACAACAGACAAGGTTGCCGGAAAAGAACATGTCGCCGACAACGTTGCTGGTAAAGGGATGTTCGTGAAGATCAATATGGATGGTGTCCCCATTGGGAGAAAAGTGGACCTCAATGCCTGCGATAGCTATGAAAAGCTTTCCTCTGCTGTTGACGAACTCTTCAGAGGCCTCCTTGCTGCTCAAAGAGATTCCTGTACTGGTGGAGCTCAAAACAGGCAAGAGGAAGAGAAAGCCATCTCTGGTTTGTTGGATGGAAGTGGAGAATACACTCTGGTTTATGAGGACAATGAAGGAGACAGGATGCTTGTTGGAGATGTGCCATGGCACATGTTCATATCAACAGTGAAGAGGCTGCGAGTACTGAAGAGTTCTGCGCTTTCTGCTTTTACCCGTGAGCTCAGAAACTCAAAACTAATCCACACGAACTTGTTCATTGATCTTCTTCTGGTTCATCAAAAGACTGACCAACTGTTTCTTTCTTTTCTTTTTCCTTCTTCTCAGTTTGTAGTAAGCAAGGCAAAGAAACAACTTGAGCCGGCACTGAAATGA 1032 0.4671 MNGRSKNEEGSPQLLDLIPKDREWHVNRDDQSSEERKLELRLGPPGEEEDYVVRERDDSRLSLRYYSNSPSINGGRNQNILSSPWACIGKKTQNNQHMGASSSSSLHSQPSSANTAVPNSSQKRTASGPVVGWPPIRSFRKNLASSSSSKPPHESQNQHVITTDKVAGKEHVADNVAGKGMFVKINMDGVPIGRKVDLNACDSYEKLSSAVDELFRGLLAAQRDSCTGGAQNRQEEEKAISGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFISTVKRLRVLKSSALSAFTRELRNSKLIHTNLFIDLLLVHQKTDQLFLSFLFPSSQFVVSKAKKQLEPALK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1732 343 ProSiteProfiles PB1 domain profile. 180 284 IPR000270 GO:0005515
Bisa10g1732 343 MobiDBLite consensus disorder prediction 94 166 - -
Bisa10g1732 343 MobiDBLite consensus disorder prediction 1 58 - -
Bisa10g1732 343 Pfam AUX/IAA family 38 288 IPR033389 -
Bisa10g1732 343 FunFam Auxin-responsive protein 175 295 - -
Bisa10g1732 343 Gene3D - 175 296 - -
Bisa10g1732 343 SUPERFAMILY CAD & PB1 domains 172 281 - -
Bisa10g1732 343 MobiDBLite consensus disorder prediction 94 127 - -
Bisa10g1732 343 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 36 286 IPR003311 GO:0005634|GO:0006355
Bisa10g1732 343 MobiDBLite consensus disorder prediction 15 58 - -
Bisa10g1732 343 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1732 Bisa-ChrBisa10 47391308 47394545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1732 183 291 B3 DNA Binding Superfamily AT4G23980 33.028 5.71e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa10g1732 AUX_IAA 1.7e-71 CL0072