Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1719 ATGTTTCAGTATGGGAACTATGACAACAAAAATCAAGTTCCAGTCTTCAACCTCTACTTGGGGGTCAACTTCTGGGCAACTGTTCAATTGCCCGATGCATCCACTTTCCAATTCAATGAAGTGTTAATCCATGGTTCCACCGTCATCGTTCAAGTGTGTCTTGTAAAAACAGGACAAGGCACGCCTTTCATTAACACTTTGGAGTTAAGGCCAATGAATGACTCTGCGTATTCCTCGACACTACCCTTGTTTTCCATGAAAAGAGTTGACGTTGGCTCTGATGAGCTTCGAGAAGCTTACACCAGGTATAAGGATGATGCGTACGATCGCTTGTGGTCCTTCTATGATTCTGCCTTTTGGAGTCCTTTAAACATGACGGTAGAAATAAGCACAAGAGACTCTAGTTATATGCTGCCACCAGAAGTATTACGCACCGCTGTTCAACCATTGAACAATTCCAACACCATATTTTTGAACTGGACAAATAATGATAAATCTGGCCAATGTTACGTGTTCCTTCACTTTACTGAAATTCAAAAGCTACCCCCTGGCAACAAGAGAATCATCAATGTCACTTTCGGTGATAATGAATCCCTCTCTCACCCTCTTACTCTGCAATACTCGAAACCTGTCACCCTAAGTTCCAAGATCCCAACTACAGGTTATGCCACTTTCAAAATCACAGAAACTGCTGAATCAGATGCTCCCCCTATCCTCAACGCATACGAGATTTACCAAATCATCCGTCAACCAGATTCACCTTCAAATGCACAAGACGTTAGTGCCATCATGGAAATCAAACAAATTTATGAGATCTATAGAACCAATTGGCAAGGTGATCCATGCGTTCCATCGAACTTTGCATGGGATGGCTTGAATTGCAGTTCTGACAGCATTCCTAGGATTATTTCACTGAACCTGAGCTCAAGCAAACTGACAGGACAGATAGTTGCTTCATTCGCCGATTTGGAAAAATTGGAGACCTTGGATTTGTCAAACAATGAACTGACAGGACAACTACCAAAATTTCTTGCAGACCTTCCCAATTTGAAATTCCTTAATTTGACAGGAAACAAACTCACAGGTTCAATTCCGAAGGCTCTAAGGGAAAAGGCTGACTTGCAACTGAGTGTGGCCAACAATCCAGTTTATCTTGGCACATTAGAAGATGGTACTCAAGTTGCAGTTAAGCTGCTTTCTGCCTCATCAAAACAAGGATATAAGGAATTTCAATCAGAGGCTCAACTCCTGACCATAATTCATCATAGAAACTTGGTTTCACTAGTTGGATATTGTCATAAAGACAATATCAAGGCATTGATCTATGAATATATGGATAATGGAGACCTCGGCCAACTACTATCAGAGAGAAACCCAAATGCTTTGAAATGGAATGAGAGGCTACAAGTCGCAGTGGATGCAGCAAAAGGACTGGAATATCTGCATAATGGTTGTAAGACTCCTATAATCCACAGAGACATAAAGCCATCTAATATCTTATTAAACAAATCCATGGTAGCCAAGATTGCTGATTTTGGGCTGTCTAGAGCATTTACAAGTGATATTGATTCTCATCTATCAACTCAGCCAGCTGGTACGCCTGGTTACATTGATCCTGAATTTCAAAGATCAGGAAACCAAAATAAGAAAAGTGACATTTATAGTCTGTCATATTTCTCGATCTATTCTGTATTAGCTTGA 1701 0.4068 MFQYGNYDNKNQVPVFNLYLGVNFWATVQLPDASTFQFNEVLIHGSTVIVQVCLVKTGQGTPFINTLELRPMNDSAYSSTLPLFSMKRVDVGSDELREAYTRYKDDAYDRLWSFYDSAFWSPLNMTVEISTRDSSYMLPPEVLRTAVQPLNNSNTIFLNWTNNDKSGQCYVFLHFTEIQKLPPGNKRIINVTFGDNESLSHPLTLQYSKPVTLSSKIPTTGYATFKITETAESDAPPILNAYEIYQIIRQPDSPSNAQDVSAIMEIKQIYEIYRTNWQGDPCVPSNFAWDGLNCSSDSIPRIISLNLSSSKLTGQIVASFADLEKLETLDLSNNELTGQLPKFLADLPNLKFLNLTGNKLTGSIPKALREKADLQLSVANNPVYLGTLEDGTQVAVKLLSASSKQGYKEFQSEAQLLTIIHHRNLVSLVGYCHKDNIKALIYEYMDNGDLGQLLSERNPNALKWNERLQVAVDAAKGLEYLHNGCKTPIIHRDIKPSNILLNKSMVAKIADFGLSRAFTSDIDSHLSTQPAGTPGYIDPEFQRSGNQNKKSDIYSLSYFSIYSVLA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1719 566 FunFam Os07g0541700 protein 445 533 - -
Bisa10g1719 566 Pfam Leucine rich repeat 304 360 IPR001611 GO:0005515
Bisa10g1719 566 Pfam Protein tyrosine and serine/threonine kinase 383 556 IPR001245 GO:0004672|GO:0006468
Bisa10g1719 566 SMART serkin_6 383 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1719 566 PRINTS Leucine-rich repeat signature 326 339 - -
Bisa10g1719 566 PRINTS Leucine-rich repeat signature 347 360 - -
Bisa10g1719 566 ProSiteProfiles Leucine-rich repeat profile. 325 348 IPR001611 GO:0005515
Bisa10g1719 566 FunFam Leucine-rich repeat receptor-like kinase 258 386 - -
Bisa10g1719 566 SUPERFAMILY Protein kinase-like (PK-like) 383 556 IPR011009 -
Bisa10g1719 566 Gene3D Ribonuclease Inhibitor 260 380 IPR032675 -
Bisa10g1719 566 Gene3D Phosphorylase Kinase; domain 1 381 445 - -
Bisa10g1719 566 Gene3D Transferase(Phosphotransferase) domain 1 446 559 - -
Bisa10g1719 566 ProSiteProfiles Protein kinase domain profile. 350 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1719 566 PANTHER OS07G0107800 PROTEIN-RELATED 1 375 - -
Bisa10g1719 566 SUPERFAMILY L domain-like 263 374 - -
Bisa10g1719 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Bisa10g1719 566 Pfam Malectin-like domain 1 247 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1719 Bisa-ChrBisa10 46900365 46909243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1719 2 556 Receptor kinase-like Gene Family AT2G19230 36.559 1.09e-113 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bisa10g1719 Malectin_like 5.4e-60 CL0202