Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1714 ATGTCTAAATCTTTCCTAAAGCCCAGCAAGCAGCACACTAATAAGCAAGATGAAGGATTGGGATTCATAAGCATTGACTGTGGGGCAAAAGCGAATTATGCAGACAAAACAACTGGGATTCGGTATGAGACAGATGAGAGGTTCATAGGAAGTGGAATCAATTCTGAAATATCTCCAGACACTTCAATCAACAATCCAGGCATAGGGTGGCAGCTGCAGACGTTAAGAAGCTTTCCGGAGGAAGAGGGAGAAAGAAACTGTTATACCCTGAATCTGAAACCAAAACGAGACAAGAACCAAAGTAATTATTATCTTATCAGAGGTATCTTTCAGTACGGCAATTTTGACAACAAAAACCAAGCTCCAGTCTTCCGCGTCGACTTGGGGGTCAACTATTGGACAAAAATTCGATTGCCCAATGCAACCGTTTTCCAAGTGAACGACATGTTAATCCATGTTCCCGCAGACACCGTACGAGTGTGTCTTGTAAACACAGGAGAAGGCACCCCTTTCATTAATTCTTTGGAGTTAAGGCCACTCAACAACTCTATCTATTCCACTTCACTTTCCTTATCTCTTGTAAATAGATACCGTTTCGGCTCTGAGCTTTCATCGACTATCACCAGGTATACGGACGATGTATACGACCGTACATGGGACACTAATAAATTATATAACAATACCATTTGGGATCTCTTAGAAACGAAGGCGGAAATAAGCACTGTGGACTCTGCCTACAGGCTGCCGCTAGAAGTGCTACGCACCGCCATTCAACCACTGAACAACTCCAAGCCCATATTTTTTAACTTGACCCTTGACATATCAGCCCAATATCTTGTGTTCCTTCACTTCGCCGAAATTCAAAAGCTTCCTCCTGGCCGCAAGAGAATCATCAATGTTGCTTTTGTGGATAATGACTCCCTCTCTCACCCTCTTACTCTTCAATACTTAAAGCCTGTCACCGTAAGTTCCAAGATCCCAACTACAGGTTATGTCACTTTCACAATCACAGCAACTGCTGAATCAGATGCTCCCCCTATCCTCAATGCCTACGAAATTTACCAAGTCATCCCACAACCAAATTCACCGTCAAACGCACAAGACGCTAATGCCATTATGGAAATCAAACAAATATACAGCATCTCCAAAATCAACTGGCAAGGTGATCCCTGCGTTCCATCTGACCTAGCATGGGATGGTTTGAATTGCAGCTCTGACAAGAATCCAAGGATCATTTCATTGGATTTGTCAAACAATGAACTGACTGGACAAGTACCAGAATTTCTTACAAATCTTCCCAATTTGAAAATCCTTAATTTGACAAGAAACAAACTCACAGGTTCCATTCCAAAGGCTTTGAGAGAAAAGGCTGACTTGCAACTAAGAAACCCAAATGTTTTGAAATGGAATGAGAGGCTACAAGTAGCAGTGGATGCAGCAAAAGGACTGGAATATCTGCATAATGGTTGTAAGACTCCTATAATCCACAGAGACATAAAGCCATCTAATATCTTATTAAACAAATCCATGGTAGCCAAGATTGCTGATTTTGGGCTGTCTAGAGCATTTACAAGTGATATTGATTCTCATCTATCGACTCAGCCAGCTGGTACGCCTGGTTACATTGATCCTGAGTAA 1638 0.42 MSKSFLKPSKQHTNKQDEGLGFISIDCGAKANYADKTTGIRYETDERFIGSGINSEISPDTSINNPGIGWQLQTLRSFPEEEGERNCYTLNLKPKRDKNQSNYYLIRGIFQYGNFDNKNQAPVFRVDLGVNYWTKIRLPNATVFQVNDMLIHVPADTVRVCLVNTGEGTPFINSLELRPLNNSIYSTSLSLSLVNRYRFGSELSSTITRYTDDVYDRTWDTNKLYNNTIWDLLETKAEISTVDSAYRLPLEVLRTAIQPLNNSKPIFFNLTLDISAQYLVFLHFAEIQKLPPGRKRIINVAFVDNDSLSHPLTLQYLKPVTVSSKIPTTGYVTFTITATAESDAPPILNAYEIYQVIPQPNSPSNAQDANAIMEIKQIYSISKINWQGDPCVPSDLAWDGLNCSSDKNPRIISLDLSNNELTGQVPEFLTNLPNLKILNLTRNKLTGSIPKALREKADLQLRNPNVLKWNERLQVAVDAAKGLEYLHNGCKTPIIHRDIKPSNILLNKSMVAKIADFGLSRAFTSDIDSHLSTQPAGTPGYIDPE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1714 545 SUPERFAMILY L domain-like 392 455 - -
Bisa10g1714 545 PANTHER OS07G0107800 PROTEIN-RELATED 23 459 - -
Bisa10g1714 545 Pfam Leucine rich repeat 413 455 IPR001611 GO:0005515
Bisa10g1714 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Bisa10g1714 545 Gene3D Ribonuclease Inhibitor 368 464 IPR032675 -
Bisa10g1714 545 SUPERFAMILY Protein kinase-like (PK-like) 461 545 IPR011009 -
Bisa10g1714 545 PRINTS Leucine-rich repeat signature 411 424 - -
Bisa10g1714 545 PRINTS Leucine-rich repeat signature 432 445 - -
Bisa10g1714 545 Pfam Malectin-like domain 25 356 IPR024788 -
Bisa10g1714 545 Gene3D Transferase(Phosphotransferase) domain 1 465 545 - -
Bisa10g1714 545 Pfam Protein kinase domain 471 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1714 545 ProSiteProfiles Protein kinase domain profile. 284 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1714 545 FunFam Os07g0541700 protein 456 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1714 Bisa-ChrBisa10 46781140 46791244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1714 462 545 Receptor kinase-like Gene Family AT1G51880 64.286 2.86e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bisa10g1714 Malectin_like 3.6e-83 CL0202