Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1691 ATGCCAATCTTGTGGAGCACTGATCAGCAACAAGTCTTTGAAGAAGAAGATGAAGCAGGCTACTCTATGCCCAACTTAGATTCAAGTATAATTCTTAATCCAACAGATCATCGTCGTCGTCGTCATCTATATTCAAATTCTCAACCATGTCCTTCTCTTTCAGTTTCCAATTTTGTGCCCCACCAGCAGCAACAACAACTCATCGATGGAGGCGCCTCACAAAACGACGATGGAGATATTTCCATGATTCTATCTGACTGTAGAAGAAGAAACCTCTGGAGCTTCAGCAATAATAAAAGTGCACTTTCCCCTGGTGAATCTCCGAGTAACGCTTCTGCCACTGCTTCACCAGCTTCCGATGGTACTGCTATGAAAAGTTATATGTGTCACGTCAATGAACTTGACGACACCGTTTCTCAGAGTACCTTCTCTCATCCATACATCGTCAATCAATACAAAATTCTCGAATCTGATGGAAGAAACAAGGACATGCAGTGTTACGTCAAAGCACTTGACGACACCGTCTCCCATGCAAAAAGGAGTAATCCTATTCCTTCCTCTCATCTATGTCAGCCAACAAAACTGAAGAAACCCAGGAGGGATTATCACATCCGTCCAATCTCATCATCATCAAACATAAACTTTCAGCATCCAAACTCATCTAGAACATCATCGTCATCATCTGACTCCATTATCATCAACGAAGAGCCTGACCCGGAGACCATAGCACATATGAAGGAGATGATTTACAGGGCTGCAGCGTTCAGGCCTGTGAACTTAGGGTTGGAGGTGGTGGAGAAGCCCAGAAGGAAGAACGTCAGGATATCCACAGATCCTCAGACTGTGGCTGCGAGACAGAGGAGGGAGAGAATAAGCGAAAGGATTAGGGTTTTGCAGAAGCTTGTGCCTGGAGGGAGCAAGATGGACACAGCCACAATGCTTGATGAGGCTGCAAATTACCTCAGGTTTCTTAGGGCACAGGTGGAAGCATTGGAAAGTCAAGGAAACAATAATTACGGATTCGGATTCTCTCAAATTTTAAGGTGA 1047 0.4451 MPILWSTDQQQVFEEEDEAGYSMPNLDSSIILNPTDHRRRRHLYSNSQPCPSLSVSNFVPHQQQQQLIDGGASQNDDGDISMILSDCRRRNLWSFSNNKSALSPGESPSNASATASPASDGTAMKSYMCHVNELDDTVSQSTFSHPYIVNQYKILESDGRNKDMQCYVKALDDTVSHAKRSNPIPSSHLCQPTKLKKPRRDYHIRPISSSSNINFQHPNSSRTSSSSSDSIIINEEPDPETIAHMKEMIYRAAAFRPVNLGLEVVEKPRRKNVRISTDPQTVAARQRRERISERIRVLQKLVPGGSKMDTATMLDEAANYLRFLRAQVEALESQGNNNYGFGFSQILR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1691 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 324 IPR011598 GO:0046983
Bisa10g1691 348 MobiDBLite consensus disorder prediction 99 120 - -
Bisa10g1691 348 Coils Coil 314 334 - -
Bisa10g1691 348 SMART finulus 281 330 IPR011598 GO:0046983
Bisa10g1691 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 280 334 IPR036638 GO:0046983
Bisa10g1691 348 MobiDBLite consensus disorder prediction 205 233 - -
Bisa10g1691 348 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 74 336 IPR045843 GO:0003700|GO:0006355
Bisa10g1691 348 Pfam Helix-loop-helix DNA-binding domain 285 324 IPR011598 GO:0046983
Bisa10g1691 348 Gene3D - 280 339 IPR036638 GO:0046983
Bisa10g1691 348 MobiDBLite consensus disorder prediction 178 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1691 Bisa-ChrBisa10 46001540 46002586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1691 193 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 70.714 1.66e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa10g1691 HLH 1.5e-05 No_clan