Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1682 ATGAAAATCGGAAAACTGTGGGCAGAAGAGAAGATGGCCACCTTGCCAGGGCAACTCGTGTGGGAGATTGTGAAGAGGAACAACTCCTTTTTGGTGAAAGAGTTTGGTAGGGGGACTCAGAGTGTGCAGTTCAGCAAAGAGAGCAACAATCTCTACAACCTCAACTCTTTCAAGTACTCTGGCTTGGCAAACAAGAAGACCGTTACTATTCAACCTGCCGGCAAAGATCAATCTGTGTTGCTGGGAACTACTAAGACTAAGAAGCAGAACAAGCCTGCTGCTTTGCTTCATAAATCTGTCATGAAGAAGGAGTTCCCAAGAATGGCAAAGGCCGTGGTAAACCAGGTGGCAAATAACCACTACAGGCCTGATCTTAAGAAGGCTGCTCTTGCAAGATTGAGTGCTGTTAATAGGAGCCTCAAAGTTGCAAAGTCTGGCGTTAAGAAGAGGAACAGACAGGCTGTGAAGGTCCGTGGTAGAAAGTGA 486 0.465 MKIGKLWAEEKMATLPGQLVWEIVKRNNSFLVKEFGRGTQSVQFSKESNNLYNLNSFKYSGLANKKTVTIQPAGKDQSVLLGTTKTKKQNKPAALLHKSVMKKEFPRMAKAVVNQVANNHYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVKVRGRK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1682 161 Pfam Ribosomal L28e protein family 19 139 IPR029004 -
Bisa10g1682 161 PANTHER 60S RIBOSOMAL PROTEIN L28 12 161 IPR002672 GO:0003735|GO:0005840|GO:0006412
Bisa10g1682 161 FunFam 60S ribosomal protein L28 16 144 - -
Bisa10g1682 161 Gene3D - 17 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1682 Bisa-ChrBisa10 45916815 45919594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1682 12 154 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.825 3.63e-77 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1682 10 45916815 45919594 Bisa06g1768 06 59230403 59233824 CCT
Bisa06g1768 06 59230403 59233824 Bisa10g1682 10 45916815 45919594 ECH
Bisa10g1682 10 45916815 45919594 Bisa10g1682 10 45916815 45919594 ECH