Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1669 ATGCTGATGAGTCGAGGACAACAGAAGCGAGGGAAGCCAGAAAAAGGTTCTGATGCTGCTGAGAAGGTTATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTGGTTTGGTCTTTGACTCATGTTGTTCAACCTGGGGATTGTATTACACTGCTTGTAGTTGTTCCTTCACAAAGTTCAGGTAGGAGATTATGGGTTTTTCCGAGATTTGCCGGTGACTGTGCCAGTGGCCACAAGAAGTCTCCTTCAGGAACAAACACAGAGCAGAAGTGTGAGATTATCACCGATTCTTGCTCTCAGATGATTCTTCAGCTTCATGACGTCTATGACCCTAATAAGATAAATGTCAAGATCAAAATAGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAGGCCAAGAAAGCCCAAGCCAATTGGGTCGTGCTAGACAAAAAGCTAAAAAATGAGGAAAAACGGTGCATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCCCAACCAAAAGTACTCCGCTTGAATTTGGTTGGACCGCTAAAGAAGAATCCTGAAGAATCAGGCATAGTACCTTCTGAGAAAGATGAGGGGGCTGGAAACCAAACCAAAAAGAAGAATCATTCCCTAAATTCCATAAAAGGAACAGTTGTCACTCCAACTAGCAGCCCAGAGCTGGGGACCCCGTTTACTGCAACTGAGGCTTGTACTTCATCAGTTTCAAGCTCAGATCTTGGAACCTCACCATTTTTCATCCCGGAGATGAATGGTGAGTTGAAAAAAGAGGAAACAATCAAGGAAAATCAAGAACTTGATGATACTAATTCAGACACAGACAGTGAAAATCTGTCCACATCTTCAGCAAGCTTGAGATTCCGGCCATGGATCACAGAATTAATTTTAAATCAAAGATCGTCTGAACACACGGAAGGAAGAATAGAGAGGTCTTATGATAAGTCTCAAGCATCTACAACCAAAGCTTTGCTGGAGAAGTTCTCAAAGCTTGATAGAGAAGCTGGAATTGATTTCTCAACCAGATGGACAACTGAATTGGATTTCAGCGGAAATGTCAGAGAAGCAGTAGCATTACCCAGAACTGCCCCTCCTGGACCCCCTCCATTGTGTTCAATATGTCAGCACAAGGCACCTGTTTTTGGAAAGCCTCCAAGGTGGTTCAGCTATGCTGAGTTAGAGCTTGCTACTGGCGGATTTTCACAAGCCAACTTCTTGGCAGAAGGAGGATTTGGCTCCGTTCACAGAGGGATTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCCCAGCACCGAAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGATAAGAGAAGGTTGCTGGTTTATGAGTATATATGCAATGGATCACTAGATTCTCATTTATACGGGCGACAACGAGAACCATTAGAATGGTCTGCCAGGCAAAAAATTGCAGTTGGAGCTGCTCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCATCGGGACATGCGGCCAAACAACATTCTCATTACTCATGATTTTGAACCACTGGTCGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACAGGTGTTGAAACTAGAGTAATTGGAACATTTGGGTATCTGGCTCCGGAGTATGCTCAAAGTGGCCAAATTACTGAAAAAGCAGATGTTTACTCCTTTGGAGTGGTATTAGTGGAACTTGTTACAGGACGAAAAGCCGTGGATCTTAATCGGCCCAAGGGACAACAGTGTCTTACCGAGTGGGCACGCCCGCTTTTAGAAGATTATGCCATCGAGGAACTGATTGATCCAAGGCTGGAAAATCGCTATTCTGAACGTGAGGTCCATTGCATGCTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTCGACCGCGTATGTCACAGGTTCTCCGAATACTAGAAGGTGACATGGTCATGGAAACAAATTACATTTCAACTTCTAGTTTCGATGTGGGAAACCGGAGTGGCCGAATCTGGACGGGGCAGCAGCCGAGGCAGCACCATTACAGTGGTCCCCTGGTAGAGGAGTCACTAGAAGCGTTCAGTGGGAAGCTCTCCCTAGAGAGATACAGGCCCTCCTCCCATTGGGAAAGGGACAAGGTTAGGAGGACTACACGTGAAGACATGTAG 2262 0.4562 MLMSRGQQKRGKPEKGSDAAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWVFPRFAGDCASGHKKSPSGTNTEQKCEIITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQANWVVLDKKLKNEEKRCMEELQCNIVVMKRSQPKVLRLNLVGPLKKNPEESGIVPSEKDEGAGNQTKKKNHSLNSIKGTVVTPTSSPELGTPFTATEACTSSVSSSDLGTSPFFIPEMNGELKKEETIKENQELDDTNSDTDSENLSTSSASLRFRPWITELILNQRSSEHTEGRIERSYDKSQASTTKALLEKFSKLDREAGIDFSTRWTTELDFSGNVREAVALPRTAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEDYAIEELIDPRLENRYSEREVHCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMETNYISTSSFDVGNRSGRIWTGQQPRQHHYSGPLVEESLEAFSGKLSLERYRPSSHWERDKVRRTTREDM 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1669 753 Pfam Protein tyrosine and serine/threonine kinase 411 676 IPR001245 GO:0004672|GO:0006468
Bisa10g1669 753 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 482 - -
Bisa10g1669 753 Gene3D Phosphorylase Kinase; domain 1 379 482 - -
Bisa10g1669 753 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 483 686 - -
Bisa10g1669 753 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1669 753 Gene3D Transferase(Phosphotransferase) domain 1 483 691 - -
Bisa10g1669 753 PANTHER OS01G0750732 PROTEIN 248 685 - -
Bisa10g1669 753 CDD STKc_IRAK 413 679 - -
Bisa10g1669 753 ProSitePatterns Tyrosine protein kinases specific active-site signature. 528 540 IPR008266 GO:0004672|GO:0006468
Bisa10g1669 753 FunFam Dual-specific kinase DSK1-like 14 169 - -
Bisa10g1669 753 MobiDBLite consensus disorder prediction 186 210 - -
Bisa10g1669 753 MobiDBLite consensus disorder prediction 191 206 - -
Bisa10g1669 753 SUPERFAMILY Protein kinase-like (PK-like) 391 685 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1669 Bisa-ChrBisa10 45645207 45649455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1669 387 696 Trihelix Transcription Factor Family AT1G70460 52.500 2.25e-101 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bisa10g1669 PK_Tyr_Ser-Thr 2.7e-41 CL0016